Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq53174 84.2 2e-11 >seq53174 Length=299220 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 49958 CTACAGGATTCGAACCTGTGACCCCCTGATTAAGAGTCAGGTGCTACCACCAACTGAGCT 50017 ||| ||||||||||||| |||||| ||||||||||||||| |||| | |||||||||||| Sbjct 132872 CTAAAGGATTCGAACCTTTGACCCGCTGATTAAGAGTCAGCTGCT-CTACCAACTGAGCT 132814 Query 50018 AAG 50020 ||| Sbjct 132813 AAG 132811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471821910985680