Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq27440 82.4 9e-11 >seq27440 Length=426762 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 || || || | |||||||||||| ||||| |||| || | |||||| || | || ||| Sbjct 329379 GTGAGCAGCGAGTAGGAGGCGATGTTGAAGGGCACGCCGAGGAAGACGTCGGCGGAGCGC 329320 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615 ||||| ||| ||||| || |||||| ||| ||||||||| | || || ||| Sbjct 329319 TGATAGAGCTGACAGGACAGCTTGCCGTTGGCGACGTAGAACTGGAACAGGCAATGGCAC 329260 Query 78616 GGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGAT 78665 || ||| ||||| || || | || | || ||||| || || ||||| Sbjct 329259 GGCGGCAGCGCCATCTTGTCGACCTCGGCCGGATTCCACGCCGAGACGAT 329210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568070395887360