Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq53174 91.5 2e-13 >seq53174 Length=299220 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/97 (81%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 66393 TTAAATAAAA--TGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCC 66450 ||| || ||| |||| | ||| |||||||||||| ||||| |||||||||||||| Sbjct 199015 TTAGATGAAAGGTGGCGCGCCCAGGAGGATTCGAACCCCCGACCTGCGGCTTAGAAGGCC 199074 Query 66451 GTTGCTCTATCCAGCTGAGCTAAGAGTGCATTAATTT 66487 |||||||||||||||||||||| | | |||| |||| Sbjct 199075 GTTGCTCTATCCAGCTGAGCTATGGGCGCATATATTT 199111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521744876741520