Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq42282 91.5 6e-14 >seq42282 Length=12392 Score = 91.5 bits (100), Expect = 6e-14 Identities = 173/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 31022 GCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGAACAGTGCGTCCGCGATC 31081 |||| | ||| ||||||||||||| || | ||| || | | || | ||||| Sbjct 7177 GCCTCGACGACGACACCGACGCCCTGGGGCTGGAGGACGTCCATGATGGCATTGCCGATC 7236 Query 31082 TGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGGCGGGAC 31141 || | |||||||| ||||| | || ||||| || | |||| |||| | ||||| Sbjct 7237 TGCTGGGTGAGCCGCTCCTGGATCTGGAGGCGCCGCGAGAACATCTCCGAGACGCGGGCG 7296 Query 31142 AGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTGACCGTGCCGAAG 31201 |||||||| ||||| | | ||| || ||||||| ||| |||| ||||| || Sbjct 7297 AGCTTGCTGAGGCCGAGCACCTTCTTGTTGGGGATGTAGCCGATGTGGACCTTGCCGTAG 7356 Query 31202 ATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCATC 31261 | || | ||| |||||||| | ||| ||| | |||||||||||| | ||||| Sbjct 7357 AAGGGGATCATGTGGTGCTCGCACAGCGAGAAGAGGTCGATGTCGCGCACGATGACCATG 7416 Query 31262 TGGTCATGCTTCTCC 31276 | || || |||||| Sbjct 7417 TCCTCGTGATTCTCC 7431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187163402160512