Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq204705 149 7e-31 seq202717 147 2e-30 seq215899 134 2e-26 seq197745 134 2e-26 seq219401 132 5e-26 seq223985 131 2e-25 seq202398 131 2e-25 seq209232 129 7e-25 seq176826 129 7e-25 seq178311 127 2e-24 seq187864 123 3e-23 seq203563 122 1e-22 seq189084 118 1e-21 seq213466 111 2e-19 seq186964 109 6e-19 seq167522 100 3e-16 seq216272 98.7 1e-15 seq58749 98.7 1e-15 seq24547 98.7 1e-15 seq134221 96.9 4e-15 seq78812 96.9 4e-15 seq74695 95.1 1e-14 seq25307 95.1 1e-14 seq157349 93.3 5e-14 seq4070 91.5 2e-13 seq159052 87.8 2e-12 seq140273 87.8 2e-12 seq114325 86.0 7e-12 seq181780 82.4 9e-11 seq168689 82.4 9e-11 seq82732 82.4 9e-11 >seq204705 Length=1723 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 1507 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1448 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 1447 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTTACGTT 1388 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| |||||||| |||||||| || ||||| || Sbjct 1387 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1328 Query 43172 AAAGATTTGCAt 43183 |||||| ||||| Sbjct 1327 AAAGATCTGCAT 1316 Score = 129 bits (142), Expect = 7e-25 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 43005 TTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGC 43064 ||||| || || || || || |||| || ||||||||||||||||| ||||| |||||| Sbjct 1722 TTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGC 1663 Query 43065 TGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG 43124 || |||| || | || |||||||||| || ||||| || | || | | |||||| Sbjct 1662 TGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCG 1603 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 || || || || |||| |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 1602 CTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1544 >seq202717 Length=961 Score = 147 bits (162), Expect = 2e-30 Identities = 150/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||| ||||| Sbjct 778 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTACCCGCGAA 719 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 718 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 659 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 658 CTCGATCGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 599 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 598 GAAGATCTGCATTGTT 583 >seq215899 Length=7104 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| |||||||| Sbjct 1229 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1288 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 1289 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1348 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| || || || || ||||| || ||||| || Sbjct 1349 CTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTGAGGGTCTTCAC 1408 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 1409 GAAGATCTGCAT 1420 >seq197745 Length=2070 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 1653 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 1712 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 1713 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 1772 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | || ||||| || || || |||| ||||| || ||||| || |||||||| || Sbjct 1773 CTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGCGTCTTGAC 1832 Query 43172 AAAGATTTGCAt 43183 |||||| ||||| Sbjct 1833 AAAGATCTGCAT 1844 >seq219401 Length=2348 Score = 132 bits (146), Expect = 5e-26 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 840 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 899 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | | |||||||||| || ||||| |||| | Sbjct 900 GATGAGGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTGACGTT 959 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| ||||| |||| |||||||| ||||| || || ||||| Sbjct 960 CTCGATCGTGTCCGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 1016 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 1017 CACGAAGATCTGCAT 1031 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||| ||||| Sbjct 114 CTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 173 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 174 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 233 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || |||| ||||| || || ||||| || ||||| || Sbjct 234 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTCAC 293 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 294 GAAGATCTGCAT 305 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 342 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 401 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 402 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 461 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| |||||||| ||||| || || ||||| Sbjct 462 CTCGATAGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 518 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 519 GACGAAGATCTGCAT 533 Score = 114 bits (126), Expect = 1e-20 Identities = 142/193 (74%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 570 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 629 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 630 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 689 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| || ||||| ||||| || || ||||| Sbjct 690 CTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTT 746 Query 43169 TACAAAGATTTGC 43181 || ||||| ||| Sbjct 747 GACGAAGATCTGC 759 >seq223985 Length=3688 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2663 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2722 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || |||| | Sbjct 2723 GATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 2782 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| || || || ||||| || || ||||| || Sbjct 2783 CTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGAGTCTTGAC 2842 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 2843 GAAGATCTGCAT 2854 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2891 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2950 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 2951 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 3010 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 3011 TTCGATGGTGTCGCTGGACTCGACCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3070 Query 43172 AAAGATTTGCAtt 43184 ||||| |||||| Sbjct 3071 GAAGATCTGCATT 3083 >seq202398 Length=1560 Score = 131 bits (144), Expect = 2e-25 Identities = 147/196 (75%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 556 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 615 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 616 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 675 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| ||||| || | |||| || ||||| || Sbjct 676 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATTGTCT---CCGTGAGGGTCTTCAC 732 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 733 GAAGATCTGCATTGTT 748 >seq209232 Length=3227 Score = 129 bits (142), Expect = 7e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 900 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 959 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 960 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1019 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 1020 CTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1079 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 1080 GAAGATCTGCATTGTT 1095 >seq176826 Length=2423 Score = 129 bits (142), Expect = 7e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||| || || Sbjct 7 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTACCCGCAAA 66 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | || |||||| ||| ||| || || || | | Sbjct 67 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGGATCTTCTGCTTCACGTT 126 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 127 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 186 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 187 GAAGATCTGCATTGTT 202 >seq178311 Length=1935 Score = 127 bits (140), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| |||||||| Sbjct 283 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 224 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 223 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 164 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| || ||||| ||||| || |||||||| Sbjct 163 CTCGATGGTGTCAGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTT 107 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 106 GACGAAGATCTGCAT 92 >seq187864 Length=484 Score = 123 bits (136), Expect = 3e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||||||| || || |||| || |||||||| || ||||| Sbjct 211 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 270 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 271 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 330 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| || ||||| ||||| || || ||||| Sbjct 331 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTT 387 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 388 GACGAAGATCTGCAT 402 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || ||||| || || |||| || |||||||| || ||||| || || |||||||||||| Sbjct 2 TCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCG 61 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 43130 | ||| | || |||||||||| || || || || | || | | || ||||| || Sbjct 62 GGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGAC 121 Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 || || |||| || || || || || || || ||||| || ||||| ||||| Sbjct 122 TCGACCTCGAGGGTAATAGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 174 >seq203563 Length=1586 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||| | || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 1031 CTCCGTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 972 Query 43052 TA-----TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 | |||| ||||||||||| | || | || |||||||||| ||| || || || Sbjct 971 GAAGAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTT 912 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | || | | ||||||||| || || || |||| ||||| || ||||| || || ||| Sbjct 911 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 852 Query 43167 TTTACAAAGATTTGCAt 43183 || || ||||| ||||| Sbjct 851 TTCACGAAGATCTGCAT 835 >seq189084 Length=554 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 314 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAA 373 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| || || || || | | Sbjct 374 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 433 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| ||||| || ||||| || |||||||| Sbjct 434 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTGCCGGTGAGCGTCTT 490 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 491 GACGAAGATCTGCAT 505 >seq213466 Length=930 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 2 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 61 Query 43092 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 ||| ||||| || | || | | |||||| ||| || || |||| |||||||| Sbjct 62 TGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 121 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAttttt 43187 ||||| || || ||||| || |||||||||||| || Sbjct 122 TTGCCAGTCAGGGTCTTCACGAAGATTTGCATTGTT 157 >seq186964 Length=541 Score = 109 bits (120), Expect = 6e-19 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 43005 TTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGC 43064 ||||| || || || || || |||| || ||||||||||||||||| ||||| |||||| Sbjct 2 TTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGC 61 Query 43065 TGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC- 43123 ||||||| || | | |||||||||| ||| || || |||| || | | ||||| Sbjct 62 TGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCC 121 Query 43124 --GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGC 43181 |||| || || |||| ||||| || || || || || ||||| || ||||| ||| Sbjct 122 GAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGC 178 Query 43182 At 43183 || Sbjct 179 AT 180 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 445 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 504 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 ||||| ||||||||||||| || | || ||||||| Sbjct 505 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 541 >seq167522 Length=139 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 43044 CCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT 43103 || ||||| ||||| ||||||||||| | || | || |||||||||| ||| || || Sbjct 2 CCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGC 61 Query 43104 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGC 43163 || | || | | ||||||||||| || || |||| |||||||| ||||| || || Sbjct 62 TTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGG 121 Query 43164 GTCTTTACAAAGATTTGC 43181 ||||| || ||||||||| Sbjct 122 GTCTTCACGAAGATTTGC 139 >seq216272 Length=10499 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || | | |||| || |||||||| || ||||| Sbjct 1420 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCCCCCGTCCTCGAGCTGCTTGCCGGCGAA 1479 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||||||||||| ||| | || |||||||||| ||| || || || Sbjct 1480 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 1533 >seq58749 Length=322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 154 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 95 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || || |||| | Sbjct 94 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTT 35 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGA 43140 | | | || |||||||| || || |||| Sbjct 34 CTCGATGGTATCGCTCGACTCGACCTCGA 6 >seq24547 Length=175 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 154 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 95 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || |||| | Sbjct 94 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 35 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGA 43140 | | | || |||||||| || || |||| Sbjct 34 CTCGATGGTATCGCTCGACTCGACCTCGA 6 >seq134221 Length=190 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| ||||| || Sbjct 70 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAA 129 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA 43107 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| Sbjct 130 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGA 185 >seq78812 Length=181 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 43043 ACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG 43102 ||||||||| ||||| ||||||||||||| || | | |||||||||| ||| || || Sbjct 181 ACCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTG 122 Query 43103 TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 |||| || | | |||||| ||| || || |||| ||||| || || ||||| || Sbjct 121 CTTGACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAG 62 Query 43163 CGTCTTTACAAAGATTTGCAt 43183 ||||| || ||||| ||||| Sbjct 61 GGTCTTGACGAAGATCTGCAT 41 >seq74695 Length=136 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || ||||| || || |||| || |||||||| || ||||| || Sbjct 1 CTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGAT 60 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGC 43114 ||| |||||||| || | || | || |||||||||| ||| || || |||| || | Sbjct 61 GAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTC 120 Query 43115 CACCGTGTCGCTCGA 43129 | |||||||||||| Sbjct 121 GATCGTGTCGCTCGA 135 >seq25307 Length=175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || || || || || |||| || |||||||| |||||||| || Sbjct 1 CTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 60 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGC 43114 ||| ||||||||||||| || | || |||||||||| ||| || || || | || | Sbjct 61 GAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTC 120 Query 43115 CACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 121 GATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTT 174 >seq157349 Length=139 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 43007 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 43066 ||| || |||||||| || |||| || ||||||||||||||||| ||||| |||||||| Sbjct 139 GTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTG 80 Query 43067 GTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCT 43126 ||| | || | || ||||||||| ||| || || || | || | | |||||||| Sbjct 79 GTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCT 20 Query 43127 CGATTCCACATCGA 43140 || || || |||| Sbjct 19 GGACTCGACTTCGA 6 >seq4070 Length=115 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || ||||| || || |||| || |||||||| |||||||| || Sbjct 115 CTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 56 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA 43107 ||| ||||||||||||| || | | |||||||||| ||| || || |||| Sbjct 55 GAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGA 3 >seq159052 Length=95 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || ||||||||||||||||| Sbjct 18 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 77 Query 43052 TATGAGTCGCTGCTGGTC 43069 ||||| ||||||||||| Sbjct 78 GATGAGGCGCTGCTGGTC 95 >seq140273 Length=115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || || || || || |||| || ||||||||||||||||| || Sbjct 115 CTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGAT 56 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||| ||||||||||||| || | | |||||||||| ||| || || || Sbjct 55 GAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTT 5 >seq114325 Length=106 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||||||||| Sbjct 94 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 35 Query 43052 TATGAGTCGCTGCTGGTCGG 43071 ||||| ||||||||||||| Sbjct 34 GATGAGGCGCTGCTGGTCGG 15 >seq181780 Length=2282 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || || || || | |||| || |||||||| || Sbjct 592 GTGCTCTCCGGTTGGATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCGAGCTGCTTGCCG 651 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || ||||||||||||| ||| | || |||| ||||| Sbjct 652 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 696 >seq168689 Length=130 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 10 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 69 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| ||||||||||| | || | || |||||||||| Sbjct 70 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 109 >seq82732 Length=124 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || |||| || |||||||| |||||||| Sbjct 31 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 90 Query 43052 TATGAGTCGCTGCTGGTCGG 43071 ||||| ||||||||||||| Sbjct 91 GATGAGGCGCTGCTGGTCGG 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570215531482360