Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq176826 89.7 4e-13 >seq176826 Length=2423 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 || |||||| || || || || || ||||| || || ||||| ||| |||| ||||| Sbjct 202 AACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTC 143 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||||||| | | | || || || || || ||||| || ||| ||||| ||| Sbjct 142 CAGCGACACCATCGAGAACGTGAAGCAGAAGATCCAGGATAAGGAGGGCATCCCCCCTGA 83 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 |||||| | || || | |||||| || || | || || | ||| ||||||| || Sbjct 82 TCAGCAGCGCCTCATCTTTGCGGGTAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTA 23 Query 115462 TAACATTCAAAAAGAGTCTACT 115483 ||||| || || ||||| ||| Sbjct 22 CAACATCCAGAAGGAGTCGACT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424182100688440