Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq217546 556 2e-153 seq203116 421 1e-112 seq202680 421 1e-112 seq202679 421 1e-112 seq198733 421 1e-112 seq217792 114 2e-20 >seq217546 Length=10770 Score = 556 bits (616), Expect = 2e-153 Identities = 979/1418 (69%), Gaps = 71/1418 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTT 243795 ||| ||||||||| || || | |||||| | ||| | |||||||||||||||||||| Sbjct 7272 ACGGTGAACTGGATCGCGTTGG-CGGCGGGCCGGGTGCGAAGGTAGTACATGCCGGTCTT 7330 Query 243796 GAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGG 243855 ||| || || |||||||| || |||||| | || ||||| | | ||| | Sbjct 7331 GAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAAC--GAG-----G 7383 Query 243856 GTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTC 243915 | ||||| || ||| |||||| |||||||||||||||| | ||| || || || Sbjct 7384 G-----CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATC 7438 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 ||||||||| ||||| | | ||| | | ||| || | |||||||| | ||| Sbjct 7439 GGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTGTACAGCTTCTT 7498 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||||| | | |||||| ||| |||||||| ||||| || ||||| | | Sbjct 7499 GATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAGACGAGCTTGTT 7558 Query 244036 -----GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAG---GTGC 244087 |||| | | ||| ||||| ||||| | | |||| ||| |||| Sbjct 7559 CTTGAGCGCGGGCGA-----CCAGAGGCC---GCGCTGCTGGAGCTCGCGCAGAAGGTGC 7610 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||| || || || || || | || | |||||| ||||| |||| | || Sbjct 7611 TCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAG 7670 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||| | || ||| |||||||||| ||||||| || || || |||||||||| | Sbjct 7671 GGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCC 7730 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 || || || ||| | || |||||| |||| | | |||| | ||||||| Sbjct 7731 ACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCC 7790 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 ||| || |||| | | || |||||| | ||| ||| ||| |||||| Sbjct 7791 CACCTGTCCGACGGCAC---------GACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTG 7841 Query 244328 CTGACG-GGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGC 244385 |||| |||| ||||||||||||| |||||| || ||| ||| || |||| | Sbjct 7842 --GACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTC---GT 7896 Query 244386 TCTCGTCGA---GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGG 244442 || | ||| |||||||||||||||||||||||||||| ||| | ||||||| Sbjct 7897 TCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCGGTTGAGCTCGCGGG 7956 Query 244443 CCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGC 244502 ||| | ||| | ||| || ||| |||||||||||||||||||| |||||||| | Sbjct 7957 CCTCGTCGCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTC 8016 Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562 ||||||||||||| ||||| ||| |||| ||| ||| |||||||||||||| ||| Sbjct 8017 CGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCACGGGGTAGTAGT 8076 Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT 244622 || ||||||||||||||||||||| ||||| || ||||||||| |||| || Sbjct 8077 TGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 8136 Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682 | ||| ||||| || ||||||| |||| | || |||| Sbjct 8137 GGTGGTCAAACTCGC------------CGTTGGTGATG------AACTTGGGCAGCGCGA 8178 Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742 |||||||||||| ||||||||||| || | ||||||||||| | ||| |||| Sbjct 8179 GCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGC 8238 Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802 | ||||| ||| ||||||||| |||||||| || ||||||||| |||||||||||| Sbjct 8239 ACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGT 8298 Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862 ||||||| |||||| ||||| |||||||||| ||| | |||||| | | ||| | Sbjct 8299 CCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACA 8358 Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | ||| ||||||||| | ||| || |||||| ||||||||| |||| Sbjct 8359 GCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCT 8418 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG--CACGACGCCGGGCACATGAG 244980 |||||||||| |||||| ||| ||||||||| | || | ||||| | ||| Sbjct 8419 CCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTG--GGGCAAAAGAG 8476 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 ||| |||||||| || || | || |||||| |||||||| ||||| ||| | | Sbjct 8477 CGACCAGTCGCCGCCCGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTA 8536 Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100 |||||| || | || | | ||| ||| ||| ||||||| |||| || | ||||| Sbjct 8537 GAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTC 8596 Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGA 245138 ||||| ||| ||||||||||||| | ||||| |||| Sbjct 8597 AAAGATGTCCGCGTGCCAGGGCTCGAGGTAGATGGCGA 8634 Score = 168 bits (186), Expect = 1e-36 Identities = 254/354 (72%), Gaps = 8/354 (2%) Strand=Plus/Plus Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 |||||||| |||||||||||||||||| ||||| |||||| |||||||| || Sbjct 8875 CCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATC 8934 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 |||| ||||||| ||||||| ||||| || |||||||| || ||| ||| | | Sbjct 8935 GAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCG 8994 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCTG 245466 ||||| || || ||| |||||||||| ||| ||| ||| ||| | || |||| |||| Sbjct 8995 TTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGTAGGTCTC 9053 Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCT 245525 || || ||| ||||||||| ||| | | ||| ||| | |||||| |||||| Sbjct 9054 GATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCT 9112 Query 245526 GGGGCGTCTCGATGGGTCCCTCGGGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||| ||||| | | | ||| || ||| | ||||||||||||||| ||||| Sbjct 9113 GGGGTCGCTCGA--CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTT 9170 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 ||| |||||||| | |||| |||||| | || | ||| || || ||||| Sbjct 9171 GAAGCCAAAGTAGGTGTAGTTGAAGTCGCGCTCGTACTTGATCGCGGCCTCGAG 9224 >seq203116 Length=2194 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 1022 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 963 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 962 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 903 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 902 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 843 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 842 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 783 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 782 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 723 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 722 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 663 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 662 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 604 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 603 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 544 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 543 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 485 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 484 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 428 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 427 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 369 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 368 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 309 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 308 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 255 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 254 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 195 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 194 TTCGAACGCCGCGTCGGCGAGTAC 171 >seq202680 Length=3004 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 2655 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 2596 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 2595 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 2536 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 2535 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 2476 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 2475 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 2416 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 2415 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 2356 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 2355 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 2296 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 2295 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 2237 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 2236 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 2177 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 2176 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 2118 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 2117 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 2061 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 2060 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 2002 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 2001 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1942 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1941 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1888 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1887 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 1828 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 1827 TTCGAACGCCGCGTCGGCGAGTAC 1804 >seq202679 Length=2935 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 2586 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 2527 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 2526 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 2467 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 2466 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 2407 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 2406 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 2347 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 2346 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 2287 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 2286 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 2227 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 2226 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 2168 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 2167 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 2108 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 2107 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 2049 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 2048 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 1992 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 1991 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 1933 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 1932 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1873 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1872 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1819 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1818 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 1759 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 1758 TTCGAACGCCGCGTCGGCGAGTAC 1735 >seq198733 Length=2163 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Plus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 1142 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 1201 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 1202 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 1261 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 1262 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 1321 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 1322 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 1381 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 1382 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 1441 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 1442 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 1501 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 1502 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 1560 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 1561 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 1620 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 1621 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 1679 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 1680 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 1736 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 1737 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 1795 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 1796 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1855 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1856 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1909 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1910 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 1969 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 1970 TTCGAACGCCGCGTCGGCGAGTAC 1993 >seq217792 Length=29351 Score = 114 bits (126), Expect = 2e-20 Identities = 245/362 (68%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 243875 AGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGG 243934 ||||||||| ||||||||||||||| | ||||||| || || | |||||| ||||| Sbjct 7080 AGGTTGAGGAACTGGCTCTGGTCGATGTAGGGCGCGCGATCCTCCGCCATGTCAATGAGC 7021 Query 243935 TCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 | || || ||||| || | |||||||| | |||||| || | || | | | Sbjct 7020 ACACGTTGCGAGATCTCCCACACGGTCTTGTATCTCAGCTTGACGTCGGCAGGCAGCTCG 6961 Query 243995 TCGATGTTCTGCACCGAGCC---CTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051 |||| | |||| ||||| || | | ||||||| | | | || | | | | | Sbjct 6960 TCGAAGGTCTGGACCGAACCTCGCGCGCCGACGATGCGGTAGTTGAGT---TCAGCCAAC 6904 Query 244052 CACAGGCCCAAGCGCTCCA-GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 ||||| |||| ||| | | || || || ||||| ||| | | ||| || || Sbjct 6903 CACAGTCCCA-GCGAACGAAGCTCCCTCACGAGGTGGAGGTTGATCTGGACAAAGTCGCC 6845 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||| ||||| |||||| || ||| ||||||||||| |||||| Sbjct 6844 AGCGCTGACCCGTCGCGTGTAGATGTTGCTCGTGTACGGTTCGATGCTCTCGACGTTGCC 6785 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 ||||||||||| ||| ||| || |||||||| | | |||||| |||||||| ||| Sbjct 6784 CAGTATCTGCGAGGTGGACGCCGTGGGCATGGGGGCCGTCAGCAGGGAGTTCCTCATGCC 6725 Query 244231 GT 244232 || Sbjct 6724 GT 6723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941693433059120