Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq217546 226 3e-54 seq203116 105 8e-18 seq202680 105 8e-18 seq202679 105 8e-18 seq198733 105 8e-18 seq221194 98.7 1e-15 seq221596 82.4 9e-11 >seq217546 Length=10770 Score = 226 bits (250), Expect = 3e-54 Identities = 876/1359 (64%), Gaps = 32/1359 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || |||||||| |||| |||||| || | |||||||||| Sbjct 7308 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 7367 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 7368 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 7427 Query 113717 CGTCCA-CGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775 | | | ||||| || ||||| || || | | | | || |||||||| || | Sbjct 7428 -GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTT 7486 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| || ||||| || || || ||||| ||| |||| |||| ||||| | Sbjct 7487 GTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGA 7546 Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 113895 ||| | | ||| | | |||||||| || || | ||| || || || Sbjct 7547 GACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAG 7606 Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGT 113955 |||| ||||| || || || || |||||| |||| | ||||| |||||||| Sbjct 7607 GTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGT 7666 Query 113956 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGG 114015 ||| |||||||||||||| ||||| |||| ||| || | ||| ||||| ||||||||||| Sbjct 7667 GTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGG 7726 Query 114016 TGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCA 114075 |||| ||| || ||| || ||||| | | ||| | ||| | | |||| Sbjct 7727 CGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCA 7786 Query 114076 GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGC 114135 ||| | || | | | | | ||| | || |||||| | || | ||| || Sbjct 7787 GTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGC 7846 Query 114136 TGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGC 114192 ||||| ||||| | |||| ||| | |||||| |||| ||| | ||| ||| || Sbjct 7847 GGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GC 7903 Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTCGT 114251 | ||||| |||| || || ||||| || || ||| | || | | |||||||| Sbjct 7904 GACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCTCGT 7962 Query 114252 CGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311 || || ||| | | || | || || || || || || || || || |||| || Sbjct 7963 CGCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGC 8022 Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCC 114368 | || || | || | ||| || || || || || ||| |||||| || | || Sbjct 8023 CGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGTTGA 8079 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 | ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 8080 TGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGT 8139 Query 114429 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 114488 || ||||| || | | ||| |||| || || |||| || ||||| || | Sbjct 8140 GGTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGC 8193 Query 114489 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 114548 |||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 8194 ACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACT 8253 Query 114549 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 114608 |||||||| | || || || || ||||| ||| || || |||||||| ||||||| Sbjct 8254 GGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGT 8313 Query 114609 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGG 114666 | ||||| || ||||| | || |||| ||| || || ||| | || ||| || Sbjct 8314 AGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGA 8373 Query 114667 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT-CTT 114725 | | |||| || || ||||||| |||||| ||| | || |||| ||| Sbjct 8374 CCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 8431 Query 114726 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 114785 ||||| | || | || || || |||| | ||||| ||||| ||||| | || | Sbjct 8432 GCCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGC 8490 Query 114786 CCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGAC 114845 || ||| || ||||||||||| ||||| || ||||| || | |||||||||| || Sbjct 8491 CCGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCG-- 8548 Query 114846 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 8549 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 8608 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 |||||| || || ||||| | |||| | ||||| || Sbjct 8609 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 8647 Score = 129 bits (142), Expect = 7e-25 Identities = 178/249 (71%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 || || || || ||| |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 8869 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 8928 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 8929 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 8988 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 115249 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 8989 CCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 9048 Query 115250 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 115309 ||||| | |||||||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 9049 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 9108 Query 115310 TATTGGGGT 115318 | |||||| Sbjct 9109 TGCTGGGGT 9117 >seq203116 Length=2194 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 282 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 341 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 342 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 401 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 402 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 458 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 459 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 517 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 518 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 577 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 578 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 636 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 637 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 695 >seq202680 Length=3004 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1915 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1974 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1975 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 2034 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 2035 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 2091 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 2092 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 2150 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 2151 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 2210 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 2211 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 2269 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 2270 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 2328 >seq202679 Length=2935 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1846 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1905 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1906 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 1965 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 1966 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 2022 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 2023 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 2081 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 2082 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 2141 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 2142 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 2200 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 2201 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 2259 >seq198733 Length=2163 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Minus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1882 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1823 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1822 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 1763 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 1762 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 1706 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 1705 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 1647 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 1646 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 1587 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 1586 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 1528 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 1527 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 1469 >seq221194 Length=10325 Score = 98.7 bits (108), Expect = 1e-15 Identities = 183/266 (69%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 29579 CGGACATCTCAACTACGAGCTTCTATGCGAGTCACGTCATCACAGCGGGTGGCGTTGGTG 29638 |||||||||| || || |||||||| ||| ||| ||||||| ||| | ||| || | Sbjct 5521 CGGACATCTCGACGACCAGCTTCTACGCGTCCCACATCATCACGGCGTGCGGCTCGGGCG 5462 Query 29639 GCATGGTCATGTTCAATGACGATGCTCATCTCAAGCGAGCTCTCATGTTTAGGGATTGGG 29698 |||||||||||||||| || | |||||||| || |||| | || |||| Sbjct 5461 GCATGGTCATGTTCAACTCGGAGAGGTACCTCAAGCGCGCGACGATGTACCGCGACTGGG 5402 Query 29699 GGCGTATCGGTGACAATATTGAGGAGCCAAGTGAACGCTTCAACCACTCCGTTGATGGCA 29758 | || ||||| ||||| ||| || || ||||||| | | || || || | Sbjct 5401 GTCGGATCGGCGACAACGCCGAGAAGGTGGAGGAGCGCTTCACCGAGGTGGTCGACGGGA 5342 Query 29759 TCCCCTACGACTGGAAGTTCCTCTATGGTGTCGCCGGG-TATCACCTCAAGGCGTGTGAG 29817 || | |||||| ||||||||||| || || || ||| || || ||||| | ||| Sbjct 5341 TCTCGTACGACACCAAGTTCCTCTACGGCGT-GCTGGGCTACAACTTCAAGAGCAGCGAG 5283 Query 29818 ATGAATGCCGCATTTGGTCTCGTCCA 29843 | || ||||| ||||| || ||||| Sbjct 5282 GTCAACGCCGCGTTTGGGCTGGTCCA 5257 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 29086 AAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATTAAAGCC 29145 ||||| |||| || || |||||| ||||| | || |||||| || || || ||| Sbjct 6059 AAGAAGGTGTACTACGCCCCCAACGGCTTTGAGGCCTACGGGGAGCTCGAGATCAAGGCC 6000 Query 29146 GTTGAGGCTTGCCTTCGAGATGGCTGGCTCGCTGGCTTTGGTGATCGCA-CTATGGAGTT 29204 || |||| |||| | ||| ||||||||||| |||||||| | || | | || || Sbjct 5999 GTCGAGGATTGCTTGCGAAGCGGCTGGCTCGCCGGCTTTGGAAACTACACCCAACGA-TT 5941 Query 29205 TGAGAAGAGGGTGGCCGACACATTCGGAAAGAGACACGGACTCTTTGTAAACTCCGG 29261 ||||||||||| |||| | || || |||| |||| || ||||| ||||| || Sbjct 5940 CGAGAAGAGGGTCGCCGGCCTCTTTGGCAAGAAGTACGGCCTGTTTGTCAACTCGGG 5884 >seq221596 Length=16041 Score = 82.4 bits (90), Expect = 9e-11 Identities = 275/423 (65%), Gaps = 4/423 (1%) Strand=Plus/Minus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| ||||| | || |||| ||||||||||| ||||| || | ||||| ||| Sbjct 15196 AACCGGTGCCCACGCCATCGGCTCCGTTCACGAGCACCATCGGCACGACTGGCAAGTAGT 15137 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 || || || | || || ||||| || | |||| ||| | |||||| || Sbjct 15136 AGCGGGGCTCGACCGGGATGCCGTCATCGTCGAGGTAGTCGAGGATCTTGTCGTCGTCCG 15077 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 171905 ||| |||||| | |||| | | || ||| ||||||||| | | || Sbjct 15076 GATGAAAGATGGTGCGAGTGATGGCGCTCAGGCGCGTGTGGATGTACCTGGCGCTGGCCG 15017 Query 171906 CATCTTTGCCACCCATGAGACGCGTCCCAAA-TTGACCACACGGTTCAAGGAGATTGATA 171964 | || | |||||| ||| || | || || ||| || | ||| | || || ||||| Sbjct 15016 CGTCCCTTCCACCCCGGAGGCGGCTGCCGAAGTTGCCCGC-CGGGTGGAGCAGGTTGATG 14958 Query 171965 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 172024 ||||| || |||| |||| || |||| | ||| || || | ||| || |||| Sbjct 14957 TTGTTGGAGCCCACAAAGTCGTTCGCCATCCCGACGATGGTCTTGTTGAGAGATTCTTCG 14898 Query 172025 CCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGC-CAACTGTGCCACCTTCATCTC 172083 ||||| ||||||||||| | | ||| | |||| || || |||||| | ||||| Sbjct 14897 CCGTGGTGGTAGGCCGAGTGCAGGGAGACCGA-ACCGCTCAGTTGGGCCACCCTAATCTC 14839 Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCC 172143 || ||||| ||||| | ||| | | | |||||| | ||| ||||||||||| Sbjct 14838 CTCGCTGAGGGCCTTGTCCAGGCAGGTGAAGAGGACCTTGCGCTGGCCGGGCTTGAGGCC 14779 Query 172144 GTC 172146 ||| Sbjct 14778 GTC 14776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595679986951960