Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq217546 365 8e-96 seq203116 268 2e-66 seq202680 268 2e-66 seq202679 268 2e-66 seq198733 268 2e-66 >seq217546 Length=10770 Score = 365 bits (404), Expect = 8e-96 Identities = 930/1394 (67%), Gaps = 77/1394 (6%) Strand=Plus/Plus Query 212585 GGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGC 212644 |||||| || ||||||||||||||||| |||||||||| |||| ||| | |||||| | Sbjct 7304 GGTGCGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGA 7363 Query 212645 TGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG--GTTCAGG 212702 ||||| || || | | || |||| |||| ||||| ||| || Sbjct 7364 GGTGAGCTTG----GCAAACGAG---GG-----CTCG---CCCA--TGTAGACGTTGAGC 7406 Query 212703 GACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGG 212762 ||||| |||||||| ||| | | | | || ||||||||||| ||||| | | ||| Sbjct 7407 GACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGC 7466 Query 212763 GAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTC 212822 | ||||||||||||||||||| | | | |||| ||| || |||| | |||| | Sbjct 7467 GGGAGCTCCCACACGGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGC 7526 Query 212823 TGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTC---CAGAGGCCC 212879 || || || || |||| | |||| | | || | || | |||||||| Sbjct 7527 TGGACCGAGCCGTTGTGCGAGACGAGCTT---GTTCTTGAGCGCGGGCGACCAGAGGCCG 7583 Query 212880 CTGGTCTCCAGGCACTTGACCAG---GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGC 212936 | || | || || | ||| ||| |||||| | |||||| || | ||| Sbjct 7584 CG---CTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGG 7640 Query 212937 ACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATC 212996 | | | ||| | ||| | ||||||||||| | || ||||||||| ||||| ||| Sbjct 7641 ATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATC 7700 Query 212997 TGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCG 213056 || | || ||| ||||||||||| ||||| ||||| ||| | || ||||||| | Sbjct 7701 TGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGG 7760 Query 213057 CCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCAC 213115 ||||| ||||| || || ||||||||||| ||| | ||| | | || || Sbjct 7761 GCGATGTTGGCGCGGA-GCGTGGCCCAGTCCCACCTGTCCGACGG---CACG------AC 7810 Query 213116 GTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTA 213175 | ||| | ||| ||| | |||| ||| | |||| ||||| ||| | ||| Sbjct 7811 GCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTA 7870 Query 213176 GGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTC 213235 || ||| | ||| || |||||| || || |||||| |||||||||||||| || Sbjct 7871 GGTGCCCTCGACCTGCGCGAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTC 7930 Query 213236 AAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCAT 213289 || || | | |||||||| |||||| | ||| | | |||| ||||| Sbjct 7931 GAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCATGATCAT 7990 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 | || || || ||||| ||||| || |||||||||||||| ||||| | || ||| Sbjct 7991 G------AAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTT 8044 Query 213350 AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || ||| | ||| || |||||| ||||| |||||| | |||||||||||| Sbjct 8045 CGAGTTGCGGGCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 8104 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 |||| |||| || ||| | | ||| | || ||| | ||| || |||| Sbjct 8105 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCG------CCGTTGGT 8158 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTG 213528 | |||| ||||| |||| |||||||||||| ||||||||||| | | | | | | Sbjct 8159 GATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGAC-G 8217 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 |||||| | || ||| ||||||||||| | |||||||||| |||| ||| |||| Sbjct 8218 TGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGT 8277 Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 | ||||| ||||| | |||||||| ||||||||||| | |||||||| | ||| | Sbjct 8278 TGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCG 8337 Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTC-CGGGC 213707 || | || || | ||| || | | |||||||||||| || | || | ||| | Sbjct 8338 ACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGC-----GCGCGCGGCC 8392 Query 213708 GT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTC 213765 | |||||| | ||||| ||| | ||| || | |||||| || | | ||| | Sbjct 8393 CTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTC-GAACAGGC 8451 Query 213766 C--CGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCA 213822 | || | | | ||| || | ||| |||||| ||| | |||| || | || || Sbjct 8452 CGGGGGCCTCGTT--GGGGCAAAAGAGCGACCAGTCGCCGCCCGTCTC-CACGCGCTTCA 8508 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 |||||||||| || | |||||| || ||| || || | || | |||| ||| | Sbjct 8509 TGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGC 8568 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | ||| || ||| || || ||||||||||||||||||||||| ||||| | ||||| Sbjct 8569 CGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCGAGGTAGA 8628 Query 213943 TGGCAAAGGCGCCC 213956 |||| || || ||| Sbjct 8629 TGGCGAAAGCACCC 8642 Score = 138 bits (152), Expect = 2e-27 Identities = 284/417 (68%), Gaps = 4/417 (1%) Strand=Plus/Plus Query 213995 GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 |||| ||| ||| || | ||| | || |||||||| |||||||| || || || Sbjct 8775 GTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGTA 8834 Query 214055 CGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGAT 214114 |||| |||||| | | | | | || ||| || ||||| ||||| |||||||||| Sbjct 8835 CGAGTTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCCGACTTGGAGAT 8894 Query 214115 CATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAG 214174 | |||||| || | | || || |||||| | || ||| || | | | | || Sbjct 8895 GAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAG 8954 Query 214175 CAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234 || |||||| ||| ||||| || | | | ||| | |||||| ||||| ||| |||| Sbjct 8955 CAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCGTCGGGGTGGC 9014 Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294 ||| | | | || | || | ||| ||||||||| | || | |||||||| || Sbjct 9015 GTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTC 9074 Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353 |||||| | | || ||| | ||| |||||||||||||| | ||| | | || | Sbjct 9075 CTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCTGGGGTCGCTCGACGA-TCTTG 9132 Query 214354 TGGG-GCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 | | || ||| |||||||||||||| || |||||||| |||||||||| |||| Sbjct 9133 CCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGGTGTAG 9189 >seq203116 Length=2194 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 190 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 249 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 250 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 308 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 309 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 368 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 369 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 425 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 426 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 482 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 483 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 542 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 543 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 602 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 603 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 659 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 660 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 716 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 717 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 776 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 777 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 836 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 837 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 895 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 896 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 955 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 956 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 1014 >seq202680 Length=3004 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 1823 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1882 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1883 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1941 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1942 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 2001 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 2002 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 2058 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 2059 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 2115 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 2116 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 2175 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 2176 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 2235 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 2236 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 2292 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 2293 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 2349 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 2350 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2409 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 2410 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 2469 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 2470 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 2528 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 2529 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 2588 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 2589 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 2647 >seq202679 Length=2935 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 1754 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1813 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1814 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1872 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1873 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 1932 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 1933 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 1989 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 1990 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 2046 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 2047 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 2106 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 2107 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 2166 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 2167 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 2223 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 2224 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 2280 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 2281 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2340 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 2341 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 2400 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 2401 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 2459 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 2460 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 2519 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 2520 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 2578 >seq198733 Length=2163 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Minus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 1974 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1915 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1914 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1856 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1855 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 1796 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 1795 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 1739 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 1738 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 1682 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 1681 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 1622 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 1621 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 1562 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 1561 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 1505 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 1504 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 1448 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 1447 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 1388 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 1387 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 1328 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 1327 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 1269 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 1268 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 1209 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 1208 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 1150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928922912910080