Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq195057 84.2 7e-12 seq185181 84.2 7e-12 seq176857 84.2 7e-12 seq176856 84.2 7e-12 >seq195057 Length=1998 Score = 84.2 bits (92), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 22843 GTTTGGCTTGTGCCAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAA 22902 ||| |||||||||||||||||||| ||| || ||||| |||||| | || || ||||| Sbjct 1972 GTTGGGCTTGTGCCAGATGATGTCGGACCGCAGGTACCACCCGTCGGCTTGAAGGGCGAA 1913 Query 22903 GGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 ||||| | ||| |||| || || | |||||| ||||| Sbjct 1912 GGCCACCCTCCACGGCAGACCTATAAGGTCTTTGGGCTT 1874 >seq185181 Length=1399 Score = 84.2 bits (92), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 22843 GTTTGGCTTGTGCCAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAA 22902 ||| |||||||||||||||||||| ||| || ||||| |||||| | || || ||||| Sbjct 27 GTTGGGCTTGTGCCAGATGATGTCGGACCGCAGGTACCACCCGTCGGCTTGAAGGGCGAA 86 Query 22903 GGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 ||||| | ||| |||| || || | |||||| ||||| Sbjct 87 GGCCACCCTCCACGGCAGACCTATAAGGTCTTTGGGCTT 125 >seq176857 Length=603 Score = 84.2 bits (92), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 22843 GTTTGGCTTGTGCCAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAA 22902 ||| |||||||||||||||||||| ||| || ||||| |||||| | || || ||||| Sbjct 208 GTTGGGCTTGTGCCAGATGATGTCGGACCGCAGGTACCACCCGTCGGCTTGAAGGGCGAA 267 Query 22903 GGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 ||||| | ||| |||| || || | |||||| ||||| Sbjct 268 GGCCACCCTCCACGGCAGACCTATAAGGTCTTTGGGCTT 306 >seq176856 Length=603 Score = 84.2 bits (92), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 22843 GTTTGGCTTGTGCCAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAA 22902 ||| |||||||||||||||||||| ||| || ||||| |||||| | || || ||||| Sbjct 208 GTTGGGCTTGTGCCAGATGATGTCGGACCGCAGGTACCACCCGTCGGCTTGAAGGGCGAA 267 Query 22903 GGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 ||||| | ||| |||| || || | |||||| ||||| Sbjct 268 GGCCACCCTCCACGGCAGACCTATAAGGTCTTTGGGCTT 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162931579599288