Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07]
224,137 sequences; 115,614,128 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq217094 167 5e-36
seq192039 167 5e-36
seq221045 116 9e-21
seq217590 116 9e-21
seq198406 105 2e-17
seq189084 105 2e-17
seq219299 100 7e-16
seq211686 100 7e-16
seq209232 98.7 2e-15
seq197745 96.9 8e-15
seq219401 95.1 3e-14
seq217586 93.3 1e-13
seq200882 93.3 1e-13
seq187864 93.3 1e-13
seq223985 91.5 3e-13
seq193485 91.5 3e-13
seq220324 89.7 1e-12
seq215483 87.8 4e-12
seq202129 87.8 4e-12
seq186964 87.8 4e-12
seq223678 86.0 1e-11
seq222520 86.0 1e-11
seq212891 86.0 1e-11
seq204705 86.0 1e-11
seq202130 86.0 1e-11
seq202717 84.2 5e-11
seq58749 84.2 5e-11
>seq217094
Length=2157
Score = 167 bits (184), Expect = 5e-36
Identities = 206/282 (73%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || |||||||| | | ||| || | ||||| || |||||||| ||||||||
Sbjct 93 GCCAAAGTCGGAGACCTTGAGGTTCCACTTGTTGTCGAGCAGGAGGTTGAGCGACTTGAG 152
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
|| | ||| |||| ||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 153 ATCGCAGTGGGCGACGCCGGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGAG 212
Query 92985 GAGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTA 93044
||||| | || | ||| || || |||| | |||||||||||| |||| |||||
Sbjct 213 GAGCTTGGTGCGGAGGAGCGGGGGGATCTCGGGGACGAGCTCGTTGTGGAGGAGCTCGTA 272
Query 93045 GAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGC 93104
|||||| || || |||| || ||||| | ||| ||||| || ||||| || || ||
Sbjct 273 GAGAGATCCGAGGGCCATGTACTCCATGATGATGAACATGCGCGGGGGCTTGGTGCAGGC 332
Query 93105 TGCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCAT 93146
|||| ||||||| |||||| || ||||||| | ||| |||
Sbjct 333 GCCCATGAAGAGGACGACGTTGGGGTGGCGCAGGCTGGACAT 374
>seq192039
Length=1004
Score = 167 bits (184), Expect = 5e-36
Identities = 206/282 (73%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || |||||||| | | ||| || | ||||| || |||||||| ||||||||
Sbjct 342 GCCAAAGTCGGAGACCTTGAGGTTCCACTTGTTGTCGAGCAGGAGGTTGAGCGACTTGAG 283
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
|| | ||| |||| ||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 282 ATCGCAGTGGGCGACGCCGGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGAG 223
Query 92985 GAGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTA 93044
||||| | || | ||| || || |||| | |||||||||||| |||| |||||
Sbjct 222 GAGCTTGGTGCGGAGGAGCGGGGGGATCTCGGGGACGAGCTCGTTGTGGAGGAGCTCGTA 163
Query 93045 GAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGC 93104
|||||| || || |||| || ||||| | ||| ||||| || ||||| || || ||
Sbjct 162 GAGAGATCCGAGGGCCATGTACTCCATGATGATGAACATGCGCGGGGGCTTGGTGCAGGC 103
Query 93105 TGCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCAT 93146
|||| ||||||| |||||| || ||||||| | ||| |||
Sbjct 102 GCCCATGAAGAGGACGACGTTGGGGTGGCGCAGGCTGGACAT 61
>seq221045
Length=4003
Score = 116 bits (128), Expect = 9e-21
Identities = 196/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || || || ||| ||| || |||||| || |||||||| |||||||||
Sbjct 2748 CCAAAGTCCGACACTTTGACGTTCCACTTGGCGTCGAGCAGGAGGTTGAGCGACTTGAGG 2689
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 2688 TCGCGGTGCACGATGCCCGACGAGTGGAGGAACTGCATGCCCTTGGCCGCCTGGAACATG 2629
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAG 93045
| || || || || |||| |||| ||||| |||||||| | | || |
Sbjct 2628 ATCTTGACCTTGAGCGCCATCGGCAGCTCGGGGATGAGGTCGTTGTGGATCAGGTCCCAC 2569
Query 93046 AGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCT 93105
|| || || |||| | ||||| || ||||||||| || ||||| || || ||
Sbjct 2568 AGGCTGCCCAGCGCCATGAACTCCATGACGATGCACATGCGCGGCGGCTTCGTGCAGGCC 2509
Query 93106 GCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCATAGT 93149
||||| || || | | ||| ||||||||||||| || ||| ||
Sbjct 2508 GCCATGAACAGCACGGTGTTGGGATGGCGCAAGTGGGACATTGT 2465
Score = 111 bits (122), Expect = 4e-19
Identities = 195/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || || || ||| ||| || |||||| || |||||||| |||||||||
Sbjct 3434 CCAAAGTCCGACACTTTGACGTTCCACTTGGCGTCGAGCAGGAGGTTGAGCGACTTGAGG 3375
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 3374 TCGCGGTGCACGATGCCCGACGAGTGGAGGAACTGCATGCCCTTGGCCGCCTGGAACATG 3315
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAG 93045
| || || || || |||| |||| ||||| |||||||| | | || |
Sbjct 3314 ATCTTGACCTTGAGCGCCATCGGCAGCTCGGGGATGAGGTCGTTGTGGATCAGGTCCCAC 3255
Query 93046 AGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCT 93105
|| || || |||| | ||||| || ||||||||| || ||||| || || ||
Sbjct 3254 AGGCTGCCCAGCGCCATGAACTCCATGACGATGCACATGCGCGGCGGCTTCGTGCAGGCC 3195
Query 93106 GCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCATAGT 93149
||||| || || | ||| ||||||||||||| || ||| ||
Sbjct 3194 GCCATGAACAGCACCGTGTTGGGATGGCGCAAGTGGGACATTGT 3151
Score = 111 bits (122), Expect = 4e-19
Identities = 195/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || || || ||| ||| || |||||| || |||||||| |||||||||
Sbjct 3962 CCAAAGTCCGACACTTTGACGTTCCACTTGGCGTCGAGCAGGAGGTTGAGCGACTTGAGG 3903
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 3902 TCGCGGTGCACGATGCCCGACGAGTGGAGGAACTGCATGCCCTTGGCCGCCTGGAACATG 3843
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAG 93045
| || || || || |||| |||| ||||| |||||||| | | || |
Sbjct 3842 ATCTTGACCTTGAGCGCCATCGGCAGCTCGGGGATGAGGTCGTTGTGGATCAGGTCCCAC 3783
Query 93046 AGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCT 93105
|| || || |||| | ||||| || ||||||||| || ||||| || || ||
Sbjct 3782 AGGCTGCCCAGCGCCATGAACTCCATGACGATGCACATGCGCGGCGGCTTCGTGCAGGCC 3723
Query 93106 GCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCATAGT 93149
||||| || || | ||| ||||||||||||| || ||| ||
Sbjct 3722 GCCATGAACAGCACCGTGTTGGGATGGCGCAAGTGGGACATTGT 3679
>seq217590
Length=3779
Score = 116 bits (128), Expect = 9e-21
Identities = 184/262 (70%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| ||| ||| || | ||||| || |||||||| || |||||||| | ||| ||
Sbjct 2971 ACCTTGACGTTCCACTTGTTGTCGAGCAGGAGGTTGAGCGATTTGAGGTCGCGGTGGACG 3030
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGCTGAACACAA 92997
||||| || ||||| || ||||| ||||| ||||| ||| ||| |||| ||
Sbjct 3031 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCAGCTTGACCTTG 3090
Query 92998 AGAACCGGA--GGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAA 93055
|| | ||| |||| | || || ||||||||||| || || ||||| || || || |
Sbjct 3091 AG--CTGGAACGGCAGCTCCGGGATCAGCTCGTTGTGCAGCACATCGTACAGCGAGCCGA 3148
Query 93056 GACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGA 93115
| |||| |||||||| | |||||| || ||||| || | || ||||| || |
Sbjct 3149 GGGCCATGAGCTCCATCACCAGGCACATCTTCTCGGGCTTGGTCGAGGCCGCCATGAACA 3208
Query 93116 GGATGACGTTCGGATGGCGCAA 93137
| | ||||| || || |||||
Sbjct 3209 GCACCACGTTGGGGTGCCGCAA 3230
>seq198406
Length=15715
Score = 105 bits (116), Expect = 2e-17
Identities = 182/261 (70%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 92878 ACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCG 92937
||||| ||| ||| || |||||| | | |||||| ||||||||||| | ||| ||
Sbjct 5662 ACCTTGACGTTCCACTTGGCGTCGAGGAGCAAGTTGAGGGACTTGAGGTCGCGGTGAACG 5603
Query 92938 ATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCGAGC-TGAACACA 92996
||||| || ||||| || ||||| ||||| ||||| ||| ||| | | |||||
Sbjct 5602 ATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGCCATCTTGAACTTG 5543
Query 92997 AAGAACCG-GAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAGAGAGAACCAA 93055
| | ||| | || || | || ||||| || || || || | |||||||| || || |
Sbjct 5542 AGG--CCGTGGGGGATGTCCGGTATGAGTTCATTCTGGAGCAGGTCGTAGAGCGACCCGA 5485
Query 93056 GACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCTGCCATAAAGA 93115
| |||| | ||||| || ||||||| || ||| || || || ||||| ||||
Sbjct 5484 GCGCCATGAACTCCATTACGATGCACAGCCGCGGCGGCCGCGTGCAGGCCGCCATGAAGA 5425
Query 93116 GGATGACGTTCGGATGGCGCA 93136
||| ||||| || || ||||
Sbjct 5424 GGACCACGTTGGGGTGCCGCA 5404
>seq189084
Length=554
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| |||||||| || || |||||||| | || || || || || |||
Sbjct 502 CAGATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTCGAGGTCGAGAGCTCGGAC 443
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| |||||||| || || || || || || ||| ||
Sbjct 442 ACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 383
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 382 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGAACCCTCGCCGACTACAACATC 323
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 322 CAGAAGGAGTCCACCCTCCACCTCGT 297
>seq219299
Length=2310
Score = 100 bits (110), Expect = 7e-16
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 93044 AGAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATG 93103
|||| || || ||| ||||||| ||||| |||||||||||||| |||||||| || || |
Sbjct 765 AGAGGGAGCCGAGAGCCATATACTCCATGACAATGCACATGTTGGGAGGCTTGGTGCAGG 706
Query 93104 CTGCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCATAGTTTCCGCCTC 93158
| ||||| ||||||| ||||| ||||| |||| |||||| || ||||||
Sbjct 705 CGGCCATGAAGAGGACCACGTTGGGATGACGCAGCCGGGCCATGGTGCGCGCCTC 651
>seq211686
Length=1444
Score = 100 bits (110), Expect = 7e-16
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 93044 AGAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATG 93103
|||| || || ||| ||||||| ||||| |||||||||||||| |||||||| || || |
Sbjct 680 AGAGGGAGCCGAGAGCCATATACTCCATGACAATGCACATGTTGGGAGGCTTGGTGCAGG 739
Query 93104 CTGCCATAAAGAGGATGACGTTCGGATGGCGCAAGTTGGCCATAGTTTCCGCCTC 93158
| ||||| ||||||| ||||| ||||| |||| |||||| || ||||||
Sbjct 740 CGGCCATGAAGAGGACCACGTTGGGATGACGCAGCCGGGCCATGGTGCGCGCCTC 794
>seq209232
Length=3227
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || ||||| | || || || |||||||| ||||
Sbjct 1076 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCTGACACGATCGAGAAC 1017
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || || || || || ||| || | || ||||||
Sbjct 1016 GTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTCATCTTC 957
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || ||||||| |||||| ||||||| ||||||
Sbjct 956 GCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCCGACTACAACATCCAGAAGGAGTCT 897
Query 206365 ACTCTTCACCTTGT 206378
||||| ||||| ||
Sbjct 896 ACTCTCCACCTCGT 883
>seq197745
Length=2070
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || || || | || || || || || |||
Sbjct 2069 CAGATCTTCGTCAAGACGCTGACCGGCAAGACCATTACCCTCGAGGTCGAGAGCTCGGAC 2010
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || ||||| || ||||| ||
Sbjct 2009 ACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCGGATCAGCAG 1950
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || |||| || |||||| ||
Sbjct 1949 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCTGACTACAACATC 1890
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||| ||||| ||
Sbjct 1889 CAGAAGGAGTCGACTCTCCACCTCGT 1864
Score = 95.1 bits (104), Expect = 3e-14
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230
||||| ||| ||| ||||| || || || ||||||||| | || || || || | |
Sbjct 1841 CAGATCTTTGTCAAGACGCTGACCGGCAAGACGATCACTCTCGAGGTCGA--GTCCAGCG 1784
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
| || |||| || ||||| ||||| || || || || || || |||||| |
Sbjct 1783 ATACTATCGAGAATGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGC 1724
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| | || ||||||||||| |||||| | || || || | || ||||||| ||||||
Sbjct 1723 AGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCCGACTACAACA 1664
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||| ||||| || || ||||| ||
Sbjct 1663 TCCAGAAGGAGTCGACCCTCCACCTCGT 1636
>seq219401
Length=2348
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || || ||||| ||||
Sbjct 1016 AAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCGGACACGATCGAGAAC 957
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| |||||||||||||| || || || || ||| || || || | || ||||||
Sbjct 956 GTCAAGCAAAAGATTCAGGACAAGGAGGGTATTCCCCCCGATCAGCAGCGCCTCATCTTC 897
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | || | ||||| |||||| ||||||| |||||
Sbjct 896 GCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAACATCCAGAAGGAGTCG 837
Query 206365 ACTCTTCACCTTGTT 206379
|| || ||||| |||
Sbjct 836 ACCCTCCACCTCGTT 822
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | || || || || || |||
Sbjct 530 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCGGAC 471
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || || || ||| ||
Sbjct 470 ACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 411
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 410 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAACATC 351
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||| ||||| ||
Sbjct 350 CAGAAGGAGTCGACTCTCCACCTCGT 325
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || || || | || || || || || |||
Sbjct 758 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTCGAGAGCTCGGAC 699
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || ||| ||
Sbjct 698 ACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAGCAG 639
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || ||||||| |||||| ||
Sbjct 638 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAACATC 579
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 578 CAGAAGGAGTCCACGCTCCACCTCGT 553
>seq217586
Length=1088
Score = 93.3 bits (102), Expect = 1e-13
Identities = 171/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || || || ||| ||| || |||||| || |||||||| |||||||||
Sbjct 835 CCAAAGTCCGACACTTTGACGTTCCACTTGGCGTCGAGCAGGAGGTTGAGCGACTTGAGG 894
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| ||| |
Sbjct 895 TCGCGGTGCACGATGCCCGACGAGTGGAGGAACTGCATGCCCTTGGCCGCCTGGAACATG 954
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGACTTCGTAG 93045
| || || || || |||| |||| ||||| |||||||| | | || |
Sbjct 955 ATCTTGACCTTGAGCGCCATCGGCAGCTCGGGGATGAGGTCGTTGTGGATCAGGTCCCAC 1014
Query 93046 AGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTTGTACATGCT 93105
|| || || |||| | ||||| || ||||||||| || ||||| || || ||
Sbjct 1015 AGGCTGCCCAGCGCCATGAACTCCATGACGATGCACATGCGCGGCGGCTTCGTGCAGGCC 1074
Query 93106 GCCATAAAGAG 93116
||||| || ||
Sbjct 1075 GCCATGAACAG 1085
>seq200882
Length=4953
Score = 93.3 bits (102), Expect = 1e-13
Identities = 108/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 92837 CTTCTCCATCT--TTGAGGAAGGCGGCCATGCCAAAATCAGAGACCTTCACGACCCATTT 92894
||||| ||||| | | |||| || | |||||| ||||||||||| ||| ||| ||
Sbjct 3726 CTTCTTCATCTCCTCGCGGAACCGGGTGAGGCCAAAGTCAGAGACCTTGACGTTCCACTT 3667
Query 92895 TTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCGATGCCAGAACTATGGAG 92954
| ||||| || |||||||| ||||||||||| | ||| ||||||| || || ||
Sbjct 3666 GTTGTCGAGCAGCAGGTTGAGCGACTTGAGGTCGCGGTGCACGATGCCCGATGAGTGCAG 3607
Query 92955 AAAATGCATCCCCTTTGCCGCTTGG 92979
|| ||||| ||||| ||||| |||
Sbjct 3606 GAAGTGCATGCCCTTGGCCGCCTGG 3582
>seq187864
Length=484
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || || || | || || || || || |||
Sbjct 399 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTCGAGAGCTCGGAC 340
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || || |||||| ||
Sbjct 339 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 280
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || |||| || |||||| ||
Sbjct 279 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCTGACTACAACATC 220
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||| ||||| ||
Sbjct 219 CAGAAGGAGTCGACTCTCCACCTCGT 194
>seq223985
Length=3688
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230
||||| || ||| || || || || || ||||| ||| | || || || || | |
Sbjct 2851 CAGATCTTCGTCAAGACTCTTACCGGCAAGACGATTACTCTCGAGGTCGA--GTCCAGCG 2794
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
|||| |||| || ||||| ||||| || || || || || ||| |||||| |
Sbjct 2793 ACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAGC 2734
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| | || ||||||||||| |||||| | || || || | || | ||||| ||||||
Sbjct 2733 AGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACA 2674
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||| ||||| ||||| ||||| ||
Sbjct 2673 TCCAGAAGGAGTCGACTCTCCACCTCGT 2646
Score = 86.0 bits (94), Expect = 1e-11
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289
||||| ||||| || ||||| ||||| || || || || || || ||||||
Sbjct 3022 GACACCATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 2963
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| | || ||||||||||| |||||| | || || || | || | ||||| ||||||
Sbjct 2962 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 2903
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||||| ||||| || |||||||| |||
Sbjct 2902 ATCCAGAAGGAGTCCACCCTTCACCTCGTT 2873
>seq193485
Length=2074
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || ||||| | || || || || ||||| ||||
Sbjct 1259 CAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGAGAA 1318
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| |||||||||||||| || || || || || || || || | || |||||
Sbjct 1319 CGTGAAGCAAAAGATTCAGGACAAGGAGGGCATCCCCCCCGATCAGCAGCGTCTCATCTT 1378
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || || || | || | ||||| |||||| ||||||| |||||
Sbjct 1379 CGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAACATCCAGAAGGAGTC 1438
Query 206364 TACTCTTCACCTTGT 206378
|| |||||||| ||
Sbjct 1439 CACCCTTCACCTCGT 1453
>seq220324
Length=5244
Score = 89.7 bits (98), Expect = 1e-12
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || ||||||||| ||| || | ||||| || |||||||| |||||||||
Sbjct 1424 CCAAAGTCCGACACCTTCACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAGG 1483
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| |||
Sbjct 1484 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGG 1537
>seq215483
Length=5067
Score = 87.8 bits (96), Expect = 4e-12
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 92837 CTTCTCCATCT--TTGAGGAAGGCGGCCATGCCAAAATCAGAGACCTTCACGACCCATTT 92894
||||| ||||| | | |||| || | |||||| || |||||||| ||| ||| ||
Sbjct 1231 CTTCTTCATCTCCTCGCGGAACCGGGTGAGGCCAAAGTCGGAGACCTTGACGTTCCACTT 1290
Query 92895 TTCGTCGACCAAAAGGTTGAGAGACTTGAGGTCTCTGTGTGCGATGCCAGAACTATGGAG 92954
| ||||| || |||||||| ||||||||||| | ||| ||||||| || || ||
Sbjct 1291 ATTGTCGAGCAGCAGGTTGAGCGACTTGAGGTCGCGGTGCACGATGCCCGACGAGTGCAG 1350
Query 92955 AAAATGCATCCCCTTTGCCGCTTGG 92979
|| ||||| ||||| ||||| |||
Sbjct 1351 GAAGTGCATGCCCTTGGCCGCCTGG 1375
>seq202129
Length=2427
Score = 87.8 bits (96), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || |||||||| ||| ||| || ||||| || |||||||| ||||||||
Sbjct 1432 GCCAAAGTCGGAGACCTTGACGTTCCACTTGGAGTCGAGCAGCAGGTTGAGCGACTTGAG 1491
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
||| | || ||||||| || ||||| || ||||| ||||| ||||| ||| |||
Sbjct 1492 GTCGCGRTGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGC 1551
Query 92985 GAGCT 92989
|| ||
Sbjct 1552 GATCT 1556
>seq186964
Length=541
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || |||||||| | || || || || |||
Sbjct 405 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 346
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || ||||| || || || ||
Sbjct 345 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAGCAG 286
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | || || |||||| ||
Sbjct 285 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCTGACTACAACATC 226
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||| ||||| ||
Sbjct 225 CAGAAGGAGTCGACTCTCCACCTCGT 200
>seq223678
Length=16118
Score = 86.0 bits (94), Expect = 1e-11
Identities = 122/172 (71%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 92866 CCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAGG 92925
||||| || || ||||| ||| ||| || |||||| || |||||||| ||||||||
Sbjct 484 CCAAAGTCGGACACCTTGACGTTCCACTTGGCGTCGAGCAGCAGGTTGAGCGACTTGAGA 425
Query 92926 TCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGCG 92985
|| | ||| ||||||| || ||||| || ||||| ||||| ||||| ||| | |
Sbjct 424 TCGCGGTGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGACC 365
Query 92986 AGCTGAACACAAAGAACCGGAGGCATAGCGGGAATGAGCTCGTTGTGAAGGA 93037
| || || || || | |||| |||| | ||||||||||| ||||
Sbjct 364 ATCTTGACCTTGAGCACGTGGGGCACGTCGGGTACAAGCTCGTTGTGCAGGA 313
>seq222520
Length=4882
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || || ||||| ||| ||| || | ||||| || |||||||| ||||||||
Sbjct 3297 GCCAAAGTCGGACACCTTGACGTTCCACTTGTTGTCGAGCAGCAGGTTGAGCGACTTGAG 3356
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGG 92979
||| | ||| ||||||| || ||||| || ||||| ||||| ||||| |||
Sbjct 3357 GTCGCGGTGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGG 3411
>seq212891
Length=1570
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 93037 ACTTCGTAGAGAGAACCAAGACCCATATATTCCATCACAATGCACATGTTTGGAGGCTTT 93096
|| ||||||||||| || ||| ||| | ||||| || |||||||| || || ||||||
Sbjct 186 ACCTCGTAGAGAGAGCCGAGAGACATRTGCTCCATGACGATGCACATCTTGGGTGGCTTT 245
Query 93097 GTACATGCTGCCATAAAGAGGATGACGTTCGGATGGCGCAA 93137
|| || || ||||| || || | ||||||||||| |||||
Sbjct 246 GTGCACGCCGCCATGAACAGCACCACGTTCGGATGCCGCAA 286
>seq204705
Length=1723
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || || ||||| | || || || |||
Sbjct 1319 CAGATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCGAGCGAC 1378
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| |||||||| ||||| || || || || || || || ||| ||
Sbjct 1379 ACGATCGAGAACGTAAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 1438
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 1439 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACATC 1498
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || || ||||| |||
Sbjct 1499 CAGAAGGAGTCCACGCTCCACCTCGTT 1525
>seq202130
Length=3764
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 92865 GCCAAAATCAGAGACCTTCACGACCCATTTTTCGTCGACCAAAAGGTTGAGAGACTTGAG 92924
|||||| || |||||||| ||| ||| || ||||| || |||||||| ||||||||
Sbjct 1391 GCCAAAGTCGGAGACCTTGACGTTCCACTTGGAGTCGAGCAGCAGGTTGAGCGACTTGAG 1450
Query 92925 GTCTCTGTGTGCGATGCCAGAACTATGGAGAAAATGCATCCCCTTTGCCGCTTGGGTGGC 92984
||| | || ||||||| || ||||| || ||||| ||||| ||||| ||| |||
Sbjct 1451 GTCGCGATGCACGATGCCCGACGAGTGGAGGAAGTGCATGCCCTTGGCCGCCTGGTAGGC 1510
Query 92985 GAGCT 92989
|| ||
Sbjct 1511 GATCT 1515
>seq202717
Length=961
Score = 84.2 bits (92), Expect = 5e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || || || ||| || ||| || | || ||||||
Sbjct 662 GTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAGCGTCTCATCTTC 721
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | || ||||||| |||||| ||||||| |||||
Sbjct 722 GCGGGTAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCG 781
Query 206365 ACTCTTCACCTTGT 206378
||||||||||| ||
Sbjct 782 ACTCTTCACCTCGT 795
>seq58749
Length=322
Score = 84.2 bits (92), Expect = 5e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || ||||| || |||||| || | || ||||||
Sbjct 38 GTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTC 97
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | ||| | ||||| |||||| ||||||| |||||
Sbjct 98 GCCGGCAAGCAGCTCGAGGACGGCCGTACTCTCGCCGACTACAACATCCAGAAGGAGTCC 157
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 158 ACGCTCCACCTCGT 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178426899839177
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |