Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq217546 215 6e-51 seq203116 123 3e-23 seq202680 123 3e-23 seq202679 123 3e-23 seq198733 123 3e-23 seq219931 107 2e-18 seq217792 95.1 1e-14 seq208161 86.0 7e-12 seq204811 86.0 7e-12 seq190346 86.0 7e-12 >seq217546 Length=10770 Score = 215 bits (238), Expect = 6e-51 Identities = 554/830 (67%), Gaps = 38/830 (5%) Strand=Plus/Minus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCC---GACTGAAGCGGCGCGCAAGTC 55194 |||||| ||| ||| ||||||| || |||||||| | | || ||| ||||| || Sbjct 8102 GAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA---GGCCCGCAACTC 8046 Query 55195 CAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGAT 55254 ||| | || ||| ||||||||| |||||| || |||||| |||||||| |||||||||| Sbjct 8045 GAACATGCGCCACAGGCCCATCGGCATCGGAGTGCAGGGCCTGGCCGACGTCTTCATGAT 7986 Query 55255 GCTCGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTC 55313 | | || | || || || || || | |||| | ||||||| || | Sbjct 7985 CATGCGCCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCGCGCCATCTTCGAGAC 7926 Query 55314 GCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACG 55373 |||||||| || || || | | ||| | || || | |||||| |||||| Sbjct 7925 -CATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCGCAGGTCGAGGGCACCTACC 7867 Query 55374 AGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGT 55433 |||| | | | ||||| || |||||| |||||| ||| || |||||| || Sbjct 7866 AGACCTACGAGGGCTCGCCCGCGTCCAAGGGCAAGCTCCAGCCCGACCTCTGGGGC--GT 7809 Query 55434 CTGACCCCATGTTTGACAAGTTGAAG-----CATG----------ACATTCACTTGTGGG 55478 | || || |||| || | | || | |||| | | | Sbjct 7808 CGTGCC----GTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACG 7753 Query 55479 GCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGG 55538 | || |||||||| || ||||||||||| ||||| || || ||||| | |||||| ||| Sbjct 7752 GTCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGG 7693 Query 55539 GCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAG 55598 ||||||||||| || ||||| |||||||||||||||||| ||||| | ||| || | Sbjct 7692 GCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACCCGCCGCATCCTCGCCG 7633 Query 55599 GTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG- 55657 | || || | | ||||| ||||||| | || || ||| || | | ||| Sbjct 7632 GCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGCGGCCTCTGGT 7573 Query 55658 AACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCA--GAATC-TGGAG 55714 ||||| | |||||| | | || | || || || ||||| | ||| |||| Sbjct 7572 CGCCCGC-GCTCAAGAACAAGCTCGTCTCGCACAACGGCTCGGTCCAGCGCATCGAGGAG 7514 Query 55715 ATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC- 55772 | ||| | || | ||||| || | ||| ||| ||||||||| | || ||| | ||| Sbjct 7513 A-TCCCCGACGACATCAAGAAGCTGTACAAGACCGTGTGGGAGCTCCCGCAG-CGCGTCA 7456 Query 55773 TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832 | || |||||| || ||||| || |||||||||||| |||||| || ||| ||| Sbjct 7455 TCATCGACATGGCCGCCGATCGCTCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCT 7396 Query 55833 TCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 ||||| | || || | |||||| | | |||||||||||| |||| ||| |||| Sbjct 7395 ACATGGGCGAGCCCTCGTTTGCCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGG 7336 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACCCGCGCCAAGGCCAAGGCG 55942 | |||||||| || |||||||| || || ||||| || ||||| ||| Sbjct 7335 GCCTCAAGACCGGCATGTACTACCTTCGCACCCGGCCCGCCGCCAACGCG 7286 Score = 156 bits (172), Expect = 5e-33 Identities = 290/416 (70%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || ||||| ||||||||||| | |||||||||||||||||||| |||||||| ||||| Sbjct 8659 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATC 8600 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||||| ||| ||| || || | || |||| ||| ||| || || Sbjct 8599 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 8540 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || ||||||||||| ||||| |||||| | ||||||| || || || || Sbjct 8539 TTCTACGGC-CTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACGGGCGGCGACTG 8481 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAA 53784 || || | ||||| |||||| ||||||||| | | || ||||||| | Sbjct 8480 GTCGCTCTTTTGCCCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGA 8421 Query 53785 CGAGATGTATCGGACG-TAC--GCAGTTCAGGGCCGCTACAAGAAG-AAGGTCAAGGCGC 53840 |||| ||| || || ||| |||| |||||||| | | | ||||||||| | Sbjct 8420 GGAGAAGTA-CGAGCGCTACGAGCAG--GAGGGCCGC-GCGCGCCGCGTGGTCAAGGCCC 8365 Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900 ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| | Sbjct 8364 AGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGT 8305 Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 ||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 8304 ACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 8249 Score = 156 bits (172), Expect = 5e-33 Identities = 255/360 (71%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGC-GTGTCCGTGAGACGTA 53250 |||||||||| ||| | ||| | ||| ||| || | | ||| ||| || |||| || Sbjct 9103 TCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCCGCCGTGATCG--AGACCTA 9046 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 |||| | || || || ||| || |||||||| || || || |||||||| || || Sbjct 9045 CGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACCCCGACGCTCTTCAACGCCGGCAC 8986 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 | || ||| ||||| ||||||||| | | |||||||| ||||||||||| || Sbjct 8985 CCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAGGAGGACTCGATCGAGGG 8926 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 ||||||||| || |||||| |||| |||| ||||||||||| | | || || ||||| | Sbjct 8925 CATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGCCT 8866 Query 53431 CCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | | || | | || |||| || | | | ||| || || |||||| | || Sbjct 8865 -CGCCGCGC-ACCGCATCCGCGCCTCCAACTCGTACATCCGCGGCACCAACGGCACCTCC 8808 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || || | || ||||||||||||| |||| |||| ||||| |||||| |||| ||| Sbjct 8807 AACGGTCTCATCCCCATGCTCCGCGTCTACAACGACACTGCCCGCTACGTCGACCAAGGT 8748 >seq203116 Length=2194 Score = 123 bits (136), Expect = 3e-23 Identities = 335/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || || ||||| Sbjct 477 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTT 536 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 537 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 596 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 597 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 656 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||| | || || || ||||| || ||||||||| ||||||| Sbjct 657 GTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 716 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 717 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 776 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 777 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 835 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 836 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 893 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 894 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 953 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 954 CAGATCGACTTCCTCGGCCGTCCAGAA 980 >seq202680 Length=3004 Score = 123 bits (136), Expect = 3e-23 Identities = 335/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || || ||||| Sbjct 2110 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTT 2169 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 2170 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 2229 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 2230 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 2289 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||| | || || || ||||| || ||||||||| ||||||| Sbjct 2290 GTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 2349 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 2350 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2409 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 2410 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 2468 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 2469 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 2526 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 2527 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 2586 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 2587 CAGATCGACTTCCTCGGCCGTCCAGAA 2613 >seq202679 Length=2935 Score = 123 bits (136), Expect = 3e-23 Identities = 335/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || || ||||| Sbjct 2041 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTT 2100 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 2101 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 2160 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 2161 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 2220 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||| | || || || ||||| || ||||||||| ||||||| Sbjct 2221 GTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 2280 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 2281 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2340 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 2341 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 2399 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 2400 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 2457 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 2458 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 2517 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 2518 CAGATCGACTTCCTCGGCCGTCCAGAA 2544 >seq198733 Length=2163 Score = 123 bits (136), Expect = 3e-23 Identities = 335/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || || ||||| Sbjct 1687 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTT 1628 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 1627 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 1568 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 1567 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 1508 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||| | || || || ||||| || ||||||||| ||||||| Sbjct 1507 GTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 1448 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 1447 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 1388 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 1387 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 1329 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 1328 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 1271 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 1270 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 1211 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 1210 CAGATCGACTTCCTCGGCCGTCCAGAA 1184 >seq219931 Length=10493 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 117350 CGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTT 117409 ||||| ||||| || ||| ||| | | |||| | |||||||| |||| |||||| Sbjct 5099 CGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTTT 5040 Query 117410 TGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGC 117469 || |||| || ||| || || ||||| ||| || || || || || ||||| ||| Sbjct 5039 TGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGATGGTAGGCCGTTTGC 4980 Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGT-CAGGTTCTTCTTGAG 117528 || | ||||||||| || ||||| ||||||||||| || | || ||| ||| ||||| Sbjct 4979 TCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTC-GCTGTGCAGTTTCCGCTTGAA 4921 Query 117529 GCAGGCATAAATCACCTT 117546 ||| ||||| | ||||| Sbjct 4920 GCACGCATACAAGACCTT 4903 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 152073 CCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATT 152132 |||||| || ||||| |||| || | ||||||| || |||||||| |||| ||| || Sbjct 5100 CCGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTT 5041 Query 152133 CTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTG 152192 || |||| | || || || || || |||||| ||||| || || ||||| || Sbjct 5040 TTGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGATGGTAGGCCGTTTG 4981 Query 152193 CTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAG 152252 ||| | | ||| || || | ||||||||||||||| || | ||| ||| ||||| Sbjct 4980 CTCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTCGCTGTGCAGTTTCCGCTTGAA 4921 Query 152253 ACAGGCGTAAATCACCTT 152270 || || || | ||||| Sbjct 4920 GCACGCATACAAGACCTT 4903 >seq217792 Length=29351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546 ||||||||||| ||| || ||||| || ||||| || | ||||| |||||||| | Sbjct 6734 AACTCCCTGCTGACGGCCCCCATGCCCACGGCGTCCACCTCGCAGATACTGGGCAACGTC 6793 Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606 ||| |||| |||||||||| |||||||||| ||| ||| | || || || ||| Sbjct 6794 GAGAGCATCGAACCGTACACGAGCAACATCTACACGCGACGGGTCAGCGCTGGCGACTTT 6853 Query 55607 GTCATGATCAACAAGCACCTCGTCAAGGACCT 55638 ||| ||||||| |||||||| | ||| || Sbjct 6854 GTCCAGATCAACCTCCACCTCGTGAGGGAGCT 6885 >seq208161 Length=4683 Score = 86.0 bits (94), Expect = 7e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 118156 CACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCC 118215 || |||||| || ||| | || |||||||||||| | ||| || || |||||||| Sbjct 2316 CAACTGTTTGTGGGAGGCCCCTCGCACGTTGCGCGGCATGCCCTTGAGCGGGAACACGCC 2375 Query 118216 AAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACC 118275 ||||||| | |||||| ||| || |||| | |||| || ||| ||||| || || Sbjct 2376 GTACTTGTCCCTGCCCACGACGGCCAGGCCGCTGAGGGCAAAGGTCTTGGCCGAATCGCC 2435 Query 118276 CTCGGTAATAATAAGAGTGCACTCG 118300 ||||| | || |||||||||||| Sbjct 2436 TTCGGTGAGGATGAGAGTGCACTCG 2460 >seq204811 Length=5403 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || ||||| || | ||||||||||||||||||||||||| ||| || ||||||| | Sbjct 3801 CGGATGGCTTCGAGGAGACGAAGGGTACCCATGGCGTCGACGTCCGCGGTATACTCGGCC 3742 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 || || || | ||||||||| ||| || | ||||| |||||||| Sbjct 3741 ACTTCGAAGGATACCTTCACGTGGCTCTGCGCCGCCAGGTTGTAGACCTC 3692 >seq190346 Length=5147 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || ||||| || | ||||||||||||||||||||||||| ||| || ||||||| | Sbjct 1347 CGGATGGCTTCGAGGAGACGAAGGGTACCCATGGCGTCGACGTCCGCGGTATACTCGGCC 1406 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 || || || | ||||||||| ||| || | ||||| |||||||| Sbjct 1407 ACTTCGAAGGATACCTTCACGTGGCTCTGCGCCGCCAGGTTGTAGACCTC 1456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545682858092600