Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq204705 129 5e-25 seq197745 122 7e-23 seq202717 113 4e-20 seq215899 109 5e-19 seq219401 105 6e-18 seq223985 100 2e-16 seq187864 100 2e-16 seq58749 100 2e-16 seq202398 96.9 3e-15 seq193485 96.9 3e-15 seq24547 96.9 3e-15 seq203563 93.3 4e-14 seq209232 89.7 4e-13 seq189084 89.7 4e-13 seq178311 89.7 4e-13 seq213466 86.0 5e-12 seq134221 86.0 5e-12 seq74695 86.0 5e-12 seq167522 84.2 2e-11 seq25307 82.4 7e-11 >seq204705 Length=1723 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1518 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 1459 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 1458 TTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1399 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || ||||| Sbjct 1398 TGCTTTACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCCGTG 1339 Query 39262 AGCGTTTTAACAAAGATTTGCATC 39285 || || || |||||||| |||||| Sbjct 1338 AGGGTCTTGACAAAGATCTGCATC 1315 >seq197745 Length=2070 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1653 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 1712 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1713 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 1772 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||| ||||| || || | ||||| | || || |||||||| || || Sbjct 1773 CTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGCGTCTTGAC 1832 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 1833 AAAGATCTGCAT 1844 >seq202717 Length=961 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || ||||| || Sbjct 778 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTACCCGCGAA 719 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 718 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 659 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||| ||||| || || | ||||| | || || ||||| || || || Sbjct 658 CTCGATCGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 599 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 598 GAAGATCTGCAT 587 >seq215899 Length=7104 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1218 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 1277 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 1278 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 1337 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | || || | || ||||| Sbjct 1338 TGCTTCACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTG 1397 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1398 AGGGTCTTCACGAAGATCTGCAT 1420 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1001 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1060 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1061 GATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1120 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||| || ||| || || || | ||||| | || || |||||||| || Sbjct 1121 CTCGATCGTGTCCGAGCT---TTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTT 1177 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1178 GACGAAGATCTGCAT 1192 >seq219401 Length=2348 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || ||||| || || ||||| || || || |||| || ||||| Sbjct 103 TGGAGGGTGGACTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 162 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 163 TTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 222 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | ||||| | || ||||| Sbjct 223 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTG 282 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 283 AGGGTCTTCACGAAGATCTGCAT 305 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 342 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 401 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | || ||| |||||| ||| ||||| || | | Sbjct 402 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 461 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | || || ||| ||| || || | ||||| | || || ||||| || || Sbjct 462 CTCGATAGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 518 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 519 GACGAAGATCTGCAT 533 >seq223985 Length=3688 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2880 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 2939 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 2940 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 2999 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | | | | || ||||| ||||| || || | ||||| | || || ||| Sbjct 3000 TGCTTCACGTTTTCGATGGTGTCGCTGGACTCGACCTCGAGTGTGATGGTCTTGCCGGTC 3059 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 3060 AGGGTCTTCACGAAGATCTGCAT 3082 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2663 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2722 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| ||||| |||| | Sbjct 2723 GATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 2782 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||| ||||| || || | || || | || || || || || || || Sbjct 2783 CTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGAGTCTTGAC 2842 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 2843 GAAGATCTGCAT 2854 >seq187864 Length=484 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 39112 TCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCG 39171 ||||| || || || |||| || ||||| ||||| || || ||||| |||||||||||| Sbjct 2 TCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCG 61 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 | || | || ||| |||||| || ||||| || | || | | |||||||| ||| Sbjct 62 GGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGAC 121 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | || ||| | || || ||||| || || || ||||| ||||| Sbjct 122 TCGACCTCGAGGGTAATAGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 174 >seq58749 Length=322 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 165 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCCTCGAGCTGC 106 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || || |||||| ||| ||| Sbjct 105 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 46 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || |||| || | | |||||||||||||| || || Sbjct 45 TGCTTGACGTTCTCGATGGTATCGCTCGACTCGACCTC 8 >seq202398 Length=1560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| |||||||| || Sbjct 556 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 615 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| ||||| || | | Sbjct 616 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 675 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||| ||||| || || | |||| || | |||| || || || || Sbjct 676 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGA---TTGTCTCCGTGAGGGTCTTCAC 732 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 733 GAAGATCTGCAT 744 >seq193485 Length=2074 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1447 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 1388 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| |||| ||| | || ||| |||||| || || Sbjct 1387 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGAATCTTT 1328 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | ||||| | || || || Sbjct 1327 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 1268 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||||||||| Sbjct 1267 AGGGTCTTGACGAAGATTTGCAT 1245 >seq24547 Length=175 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 165 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGC 106 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 105 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 46 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || |||| || | | |||||||||||||| || || Sbjct 45 TGCTTGACGTTCTCGATGGTATCGCTCGACTCGACCTC 8 >seq203563 Length=1586 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| | || || || || ||||| || || || | Sbjct 1055 GCGGAGCACGAGGTGGAGGGTGGACTCCGTCTGGATGTTGTAGTCGGCCAGAGTGCGGCC 996 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGA-----CGCTGCTGGTCGGTGGGCACGCTC 39183 ||| || ||||| |||||||| || | ||| ||||||||||| | || | || | Sbjct 995 GTCCTCGAGCTGCTTGCCCGCGAAGAAGAGATGAGGCGCTGCTGGTCAGGAGGGATGCCC 936 Query 39184 TCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACC 39243 || |||||| ||| ||||| || | || | | ||| ||||| ||||| || || | Sbjct 935 TCCTTGTCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGG 876 Query 39244 GTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| | || || ||||| || || || ||||| ||||| Sbjct 875 GTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 835 >seq209232 Length=3227 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 900 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 959 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 960 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1019 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || ||||| || || | ||||| | || || || || || || || Sbjct 1020 CTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1079 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1080 GAAGATCTGCAT 1091 >seq189084 Length=554 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || ||||| |||| || ||||| Sbjct 303 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGACCGTCCTCGAGCTGC 362 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| || ||| Sbjct 363 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 422 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 423 TGCTTCACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTGCCG 479 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || ||||| ||||| Sbjct 480 GTGAGCGTCTTGACGAAGATCTGCAT 505 >seq178311 Length=1935 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 294 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 235 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 234 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 175 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | || || | || || Sbjct 174 TGCTTCACGTTCTCGATGGTGTCAGAGCT---CTCGACCTCGAGGGTAATGGTCTTGCCG 118 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 117 GTCAGCGTCTTGACGAAGATCTGCAT 92 >seq213466 Length=930 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || ||||| ||||| ||||| || || ||||||||||| | ||| | || ||| |||||| Sbjct 2 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 61 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || || || | || | | || ||| |||||| || || | ||||| | Sbjct 62 TGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 121 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || || ||||||||||| Sbjct 122 TTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 153 >seq134221 Length=190 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 59 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 118 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| || | | ||| |||||| ||| ||| Sbjct 119 TTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 178 Query 39202 TGTTTGA 39208 || |||| Sbjct 179 TGCTTGA 185 >seq74695 Length=136 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| ||||| || || || Sbjct 2 TTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATG 61 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 ||||||||||| || | ||| | || ||| |||||| ||| ||||| |||| || | Sbjct 62 AGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCG 121 Query 39217 ACCGTATCGCTCGAC 39231 | ||| ||||||||| Sbjct 122 ATCGTGTCGCTCGAC 136 >seq167522 Length=139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 39144 GCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG 39203 ||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||||| Sbjct 1 GCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTG 60 Query 39204 TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAG 39263 || | || | | || ||||||||||| || || | ||||| | || || ||||| Sbjct 61 CTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAG 120 Query 39264 CGTTTTAACAAAGATTTGC 39282 || || || ||||||||| Sbjct 121 GGTCTTCACGAAGATTTGC 139 >seq25307 Length=175 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| ||||| || || || Sbjct 2 TTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 61 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTT 39206 |||||||||||||||| ||| | || ||| |||||| ||| ||||| || Sbjct 62 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTT 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428372223305081