Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq223142 118 1e-21 seq203637 114 1e-20 seq223622 113 4e-20 seq194102 113 4e-20 seq177117 109 5e-19 seq211828 105 7e-18 seq221835 104 2e-17 seq198453 102 8e-17 seq190944 102 8e-17 seq209500 100 3e-16 seq100797 98.7 1e-15 seq215275 91.5 1e-13 seq176952 91.5 1e-13 seq209919 86.0 6e-12 seq211431 82.4 8e-11 seq160793 82.4 8e-11 >seq223142 Length=9055 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 6099 GCCGCCGCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 6158 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 6159 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 6218 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || || || || | | || | |||||| ||| ||| || Sbjct 6219 GATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGAC 6278 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 6279 CTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 6326 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 6327 GCCGCCGCGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 6386 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| || ||||| |||| ||||| |||||||| || || Sbjct 6387 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGG 6446 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | ||||| | | || || Sbjct 6447 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTTTCGAC 6506 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| ||| || ||||| || ||||| Sbjct 6507 CTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 6554 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 6776 GCCGCCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 6835 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| || || || |||| || || |||||||| || || Sbjct 6836 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGG 6895 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | |||||||| | ||| || Sbjct 6896 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATTGTGTCGGACGACTCGAC 6955 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 6956 CTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 7003 Score = 100 bits (110), Expect = 3e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 4858 GCCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 4917 Query 139597 CATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | || |||| ||| |||||||| || || || |||| || || ||||| |||||| Sbjct 4918 GAGGGT--TCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGA 4975 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| || || || || | | || | ||||| | | ||| Sbjct 4976 GGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCG 5035 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | ||| | |||||||||||| | ||| || ||||| || |||||| Sbjct 5036 ACCTCGAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 5086 >seq203637 Length=1734 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 1545 GCCGCCACGCAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 1486 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| |||||||| |||| || || ||||||||||| || Sbjct 1485 GAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCGGGGGG 1426 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| || ||||| || | | || | ||||| | | |||||| Sbjct 1425 AATACCCTCCTTGTCCTGAATCTTTTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCCAC 1366 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGC 139767 ||| | ||| | ||||||||||||| || || ||||| || ||||| || Sbjct 1365 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATCGC 1315 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| |||||||| |||| ||||| ||||| ||||| || || || || || Sbjct 1701 GTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTT 1642 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | || | ||||||| | ||| ||||| | || | Sbjct 1641 GTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGCGTAAT 1582 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||| | || || ||||| || ||||| Sbjct 1581 CGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1546 >seq223622 Length=3914 Score = 113 bits (124), Expect = 4e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| |||||||| |||| || || |||||||||||||| ||||| || || Sbjct 2216 GTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTT 2275 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| || ||||| || | | || | |||||| ||| ||| ||||| | ||| | Sbjct 2276 GTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGAT 2335 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||||| || || ||||| || |||||| Sbjct 2336 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 2372 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 1617 GCCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1676 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | ||| |||||||| || ||||| |||| ||||| ||||| || || || Sbjct 1677 CAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 1736 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | ||||| | | ||| || Sbjct 1737 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAGCTCTCGAC 1796 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| ||| || ||||| || ||||| Sbjct 1797 CTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 1844 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | || | ||||| || ||||| || || ||||| || ||| Sbjct 1845 GCCGCCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 1904 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| |||||||| |||| ||||| ||||| ||||| || Sbjct 1905 GAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCGGGGGG 1964 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| || || || | | || | ||||||| | ||| || Sbjct 1965 AATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCGAC 2024 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||||||| | || || ||||| || ||||| Sbjct 2025 CTCGAGCGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2072 >seq194102 Length=976 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | ||| | ||| | ||| ||||| ||||| ||||| || ||| Sbjct 58 GCCGCCGCGCAGACGAAGAACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGC 117 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || || || |||| || || |||||||| || || Sbjct 118 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGG 177 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| || || || | | || | || ||| ||| ||| || Sbjct 178 AATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGAC 237 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG 139766 ||| | ||| | ||||||||||| | || || ||||| || ||||||| Sbjct 238 CTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATAG 287 >seq177117 Length=2010 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||||| || ||||| || || ||||| || ||| Sbjct 1472 GCCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1413 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| || || || |||| ||||| ||||||||||| || Sbjct 1412 GAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGG 1353 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || ||||| || | | || | ||||||| | ||| || Sbjct 1352 GATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGGACGACTCGAC 1293 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||| | || || ||||| |||||||| Sbjct 1292 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1245 >seq211828 Length=4713 Score = 105 bits (116), Expect = 7e-18 Identities = 184/266 (69%), Gaps = 9/266 (3%) Strand=Plus/Minus Query 152716 GAGCGACGGTAAATTGCTGGGAATTGGCCGCCGGAAGCGTACGAAAATAGTACATGCCCG 152775 || ||||||| || || | ||||| || || | || |||| ||||||||||| | Sbjct 2014 GATCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGGTAGTACATGCCGG 1955 Query 152776 TCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGACGCCATCTTAGCCAAAGTAGGGT 152835 |||||||||| ||||| |||| | ||||| ||| | | ||| || || | || | Sbjct 1954 TCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAACGAGGGCT 1895 Query 152836 CGGCCATGTACACGTTAAACGATTGACTTTGATCAATAAATGCGCCTCTATCTGCTGCCA 152895 || ||||||| ||||| | ||| || || || || || | || | ||| || |||| Sbjct 1894 CGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCCA 1835 Query 152896 TGTCGATCATGAATTTTCCGTTGTTGTGCCAGCATTCCCAGATTGTCATGTACAGCTTTT 152955 ||||||| |||| || | || | ||| ||||| | ||| |||||||||| | Sbjct 1834 TGTCGATGATGA------CG-CGCTGCGGGAGC--TCCCACACGGTCTTGTACAGCTTCT 1784 Query 152956 TAATGTTGTCGGGAATTTCATCTATG 152981 | |||| |||||| || || || ||| Sbjct 1783 TGATGTCGTCGGGGATCTCCTCGATG 1758 >seq221835 Length=4727 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 2209 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 2268 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || |||||||||||||| ||||| || ||||| ||| || || || Sbjct 2269 GCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 2328 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| ||| ||| ||||| | ||| | ||||||||||| | || Sbjct 2329 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 2388 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 2389 TTCACGAAGATCTGCAT 2405 >seq198453 Length=848 Score = 102 bits (112), Expect = 8e-17 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||||| || ||||| || || ||||| || ||| Sbjct 827 CCGCCGCGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 768 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| || || ||||| || || || Sbjct 767 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGRTCRGGRGGG 708 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | ||||| | ||| ||| Sbjct 707 ATGCCCTCCTTGTCCTGGATCTTCTGCTTSACGTTCTCGATSGTGTCRSWKGACTCGACC 648 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 647 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 601 >seq190944 Length=484 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 454 GCCGCCGCGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 395 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | ||| |||||||| || || || |||| ||||| ||||| || || || Sbjct 394 CAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 335 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | || ||| ||| ||| || Sbjct 334 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATAGTATCGCTGGACTCGAC 275 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | |||||||||||||| ||| || || || || |||||| Sbjct 274 CTCGAGAGTGATCGTCTTGCCGGTCAGCGTCTTGACAAAGATCTGCATA 226 Score = 100 bits (110), Expect = 3e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | || ||||| || || ||||| || || | Sbjct 225 CCGCCACGAAGACGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCC 166 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| || || |||||||| || || Sbjct 165 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGG 106 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || || | | || | ||||| | | ||| ||| Sbjct 105 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCGACC 46 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762 || | ||| | ||||||||||||| ||| || ||||| || ||| Sbjct 45 TCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGC 1 >seq209500 Length=1097 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| | || ||||| || ||| || |||| ||| |||||||| || || Sbjct 1036 GTGGACTCCGTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCC 977 Query 139628 GC-----ATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTT 139682 || | |||| || || ||||| || ||||| ||||| || ||||| ||| || | Sbjct 976 GCGAAGAAGAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCT 917 Query 139683 GTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCA 139742 | |||| | || | |||||| ||| ||| ||||| | ||| | |||||||||||||| Sbjct 916 GCTTTACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTCA 857 Query 139743 ACGTTTTTACGAATATTTGCATAGC 139767 || || ||||| || ||||| || Sbjct 856 GGGTCTTCACGAAGATCTGCATGGC 832 >seq100797 Length=331 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || || | |||| ||| |||||||| || || Sbjct 330 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCG 271 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || |||||||||||||| |||||||| ||||| ||| || || || Sbjct 270 GCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 211 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||| ||||| | ||| | ||||||||| || | || Sbjct 210 ACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTC 151 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 150 TTGACGAAGATCTGCAT 134 >seq215275 Length=6875 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 4218 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 4159 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || ||||| || ||||| ||| || || || Sbjct 4158 GCGAAGATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTG 4099 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| ||| ||| ||||| | || | |||||||||||| | || Sbjct 4098 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGAGTC 4039 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 4038 TTGACGAAGATCTGCATA 4021 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || || || |||| || || ||||| || || || ||||| || || Sbjct 3907 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 3848 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | ||| | |||||| ||| ||| ||||| | || | Sbjct 3847 GTCCTGGATCTTCTGCTTCACGTTTTCGATGGTGTCGCTGGACTCGACCTCGAGTGTGAT 3788 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||||| || || ||||| || ||||| Sbjct 3787 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3752 >seq176952 Length=5663 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | || | ||| | || ||||| || || ||||| || ||| Sbjct 1145 GCCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1086 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| || || || |||| || || ||||| || || || Sbjct 1085 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGGGG 1026 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || || || || | | || | |||||| ||| ||| || Sbjct 1025 GATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 966 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 965 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 918 >seq209919 Length=3227 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || || ||||| || ||| || || | ||| |||||||| || || Sbjct 2333 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCG 2274 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || ||||| || ||||| ||| || || || Sbjct 2273 GCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 2214 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||| ||||| | ||| | ||||||||||| | || Sbjct 2213 ACGTTCTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 2154 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 2153 TTCACGAAGATCTGCAT 2137 >seq211431 Length=3216 Score = 82.4 bits (90), Expect = 8e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 139618 CTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGAT 139677 ||| || || || |||| ||||| ||||| |||||||| ||||| || ||||| ||| Sbjct 220 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGAT 161 Query 139678 TTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCC 139737 || || || | | || | ||||| | | ||| ||||| | ||| | |||||||| Sbjct 160 CTTCTGCTTCACGTTCTCGATAGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCC 101 Query 139738 GGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || ||||| || |||||| Sbjct 100 GGTCAGGGTCTTGACGAAGATCTGCATA 73 >seq160793 Length=121 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 139643 TGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTG 139702 ||||| |||||||| ||||| || ||||| ||| ||||| || | | || | ||| Sbjct 120 TGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTG 61 Query 139703 TCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762 ||| ||| ||| ||||| | ||| | |||||||||||||| || || ||||| || ||| Sbjct 60 TCGCTGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494672032014400