Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq185835 89.7 2e-13 >seq185835 Length=18468 Score = 89.7 bits (98), Expect = 2e-13 Identities = 78/95 (82%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAAC-GCCTGGAGTAATCT 17873 ||||||||||| ||||||||||| || | ||||||||||||| | | | || || | Sbjct 4189 GGAGACGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGACGGG---AAACC 4245 Query 17874 GGGTCGAGGGTTCGAATCCCTCCGTCTCCGCCACT 17908 | |||||||||||||||||| ||||||||||||| Sbjct 4246 GTCTCGAGGGTTCGAATCCCTTCGTCTCCGCCACT 4280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153857561995956