Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq179470 96.9 9e-16 >seq179470 Length=35510 Score = 96.9 bits (106), Expect = 9e-16 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 32291 GAAAGGTTGGCACGGGCATGATCCGGTCCACACGGGGCGATCGTCGGGCCAGCCGGCGCG 32350 ||| || ||||| || ||||||||||| || || || || |||| | ||| ||| | Sbjct 626 GAAGGGCTGGCAGGGCGGCGATCCGGTCCAGACCGGCCGGTCCTCGGCCACGCCAGCGAG 685 Query 32351 CCGCAGTGCGTAGGACCACACGCCGATGCCGGCGAAGAAATGGCACTGGCTGTATCCGCG 32410 ||||||||||||| ||| ||||||| |||||||||||||| || || | | ||||| Sbjct 686 GCGCAGTGCGTAGGGCCAACCGCCGATCCCGGCGAAGAAATGACATTGCGCGAAGCCGCG 745 Query 32411 CAGGTC 32416 |||||| Sbjct 746 CAGGTC 751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135244910798868