Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq219995 84.2 3e-11 >seq219995 Length=44233 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 165219 TGCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTCGTGG 165278 |||||| |||||||||||||||||||||| |||| |||| | ||| || ||||| Sbjct 14818 TGCCCAGGTGGCGGAATTGGTAGACGCGCACGGTTCAGGTCCGTGTGCCGCAAGGCGTGG 14877 Query 165279 AGGTTCAAGTCCTCTCTTGGGCAC 165302 |||||| ||||||||| ||||||| Sbjct 14878 AGGTTCGAGTCCTCTCCTGGGCAC 14901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626205906092800