Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01-
08] 224,482 sequences; 120,415,301 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq223142 127 2e-24
seq176952 120 2e-22
seq190944 118 9e-22
seq223622 109 4e-19
seq194102 105 5e-18
seq209500 100 2e-16
seq198453 100 2e-16
seq221835 98.7 8e-16
seq209501 96.9 3e-15
seq220036 93.3 3e-14
seq209919 93.3 3e-14
seq207513 93.3 3e-14
seq177117 93.3 3e-14
seq215275 91.5 1e-13
seq212599 87.8 1e-12
seq205002 87.8 1e-12
seq201539 87.8 1e-12
seq201538 87.8 1e-12
seq216265 82.4 6e-11
seq211431 82.4 6e-11
seq205385 82.4 6e-11
seq199366 82.4 6e-11
seq199365 82.4 6e-11
seq198112 82.4 6e-11
seq182744 82.4 6e-11
seq96961 82.4 6e-11
>seq223142
Length=9055
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| |||||||||||||| || |||||||||||||||| ||| | ||||||| | ||
Sbjct 6124 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 6183
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || ||| | |||||| ||||| ||| | |
Sbjct 6184 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 6243
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||||||| || ||| || | ||| ||||| || ||||||
Sbjct 6244 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 6303
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 6304 AGGGTCTTGACGAAGATCTGCAT 6326
Score = 113 bits (124), Expect = 4e-20
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||| | |||| ||||||| | ||
Sbjct 4883 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGACCGTCCTCGAGCTGC 4942
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| ||| | |||||| ||||| ||| | |
Sbjct 4943 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 5002
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910
|||||||| | | | |||| ||| |||| || || | |||||| || || ||||
Sbjct 5003 TGCTTCACGTTCTCGATCGTGT--CCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGG 5060
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
| ||||| ||||| || ||||||||
Sbjct 5061 TGAGCGTCTTGACGAAGATCTGCAT 5085
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| |||||||||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 6801 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGC 6860
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || || | |||||| ||||| || | |
Sbjct 6861 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 6920
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | |||||| | ||| || | ||| ||||| || ||||||
Sbjct 6921 TGCTTCACGTTCTCGATTGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 6980
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 6981 AGGGTCTTCACGAAGATCTGCATT 7004
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 6352 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGC 6411
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || || | |||||| ||||| || | |
Sbjct 6412 TTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 6471
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGC--TCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|||||||| | | | |||| ||| || || || | ||||||||| || ||||
Sbjct 6472 TGCTTCACGTTCTCGATCGTGT--CCGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCGG 6529
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||||||| ||||| || ||||||||
Sbjct 6530 TCAGCGTCTTGACGAAGATCTGCAT 6554
>seq176952
Length=5663
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 1120 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 1061
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|||||||| | || || ||||| ||||| || | |||||| ||||| ||| | |
Sbjct 1060 TTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTC 1001
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||||||| || ||| || | ||||||||| || ||||||
Sbjct 1000 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 941
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 940 AGGGTCTTCACGAAGATCTGCATT 917
>seq190944
Length=484
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||||| ||| ||||||| | ||
Sbjct 429 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGC 370
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| |||||| || | |||||| ||||| || | |
Sbjct 369 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 310
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||| |||| || ||| || | ||||| || || ||||||
Sbjct 309 TGCTTCACATTCTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTGCCGGTC 250
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
||||| |||||||| ||||||||
Sbjct 249 AGCGTCTTGACAAAGATCTGCAT 227
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/203 (71%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||| |||| ||| | ||||||| | ||
Sbjct 201 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCGAGCTGC 142
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || ||| || | ||| || ||||| || | |
Sbjct 141 TTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 82
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910
||||| || | | | |||| ||| |||| || || | ||| ||||| || ||||
Sbjct 81 TGCTTGACGTTCTCGATCGTGT--CCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGG 24
Query 16911 TCAGCGTTTTGACAAAAATCTGC 16933
||||||| ||||| || ||||||
Sbjct 23 TCAGCGTCTTGACGAAGATCTGC 1
>seq223622
Length=3914
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||||| || | ||||||| | ||
Sbjct 1642 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 1701
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| |||||| || | |||||| ||||| || | |
Sbjct 1702 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1761
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||||| | ||| || | ||| ||||| || ||||||
Sbjct 1762 TGCTTCACGTTCTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTC 1821
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||| || ||||||||
Sbjct 1822 AGCGTCTTGACGAAGATCTGCAT 1844
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| |||||||||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 2397 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 2456
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| || | |||||| ||||| || | |
Sbjct 2457 TTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 2516
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | ||||||| | ||| || | ||||||||| || || ||
Sbjct 2517 TGCTTTACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCCGTG 2576
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| ||||||||
Sbjct 2577 AGGGTCTTGACAAAGATCTGCAT 2599
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 16756 GTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTG 16815
|||||||||||| | || | ||||||| | || || || || | || || |||||
Sbjct 2192 GTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTG 2251
Query 16816 TTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTC 16875
|| || ||| | |||||| ||||| ||| | |||||||| | | | |||||
Sbjct 2252 CTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTC 2311
Query 16876 GCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||| || | ||||||||| || |||||||| || || || || ||||||||
Sbjct 2312 GCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2371
>seq194102
Length=976
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| ||||||||||||||||| |||||||||||||||| ||| | ||||||| | ||
Sbjct 83 TGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 142
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || || | ||||| ||||| || | |
Sbjct 143 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 202
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | || |||| || ||| || | |||||| || || |||||
Sbjct 203 TGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTG 262
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||||||
Sbjct 263 AGGGTCTTCACGAAGATCTGCAT 285
>seq209500
Length=1097
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 5/208 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||| | || |||||||||||||||| || | ||||||| | ||
Sbjct 1042 TGGAGGGTGGACTCCGTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 983
Query 16793 TTGCCCGC-----ATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA 16847
|||||||| | | || || ||||| ||||| ||| | |||||| ||||| |
Sbjct 982 TTGCCCGCGAAGAAGAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGA 923
Query 16848 TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTC 16907
| | |||||| || | | | ||||||| || ||| || | |||||| || || |
Sbjct 922 TCTTCTGCTTTACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATCGTCTTGC 863
Query 16908 CGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||| || || || || ||||||||
Sbjct 862 CGGTCAGGGTCTTCACGAAGATCTGCAT 835
>seq198453
Length=848
Score = 100 bits (110), Expect = 2e-16
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||| | ||| | ||||||| | ||
Sbjct 803 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 744
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || || | |||||| ||||| || | |
Sbjct 743 TTGCCGGCGAAGATGAGGCGCTGCTGRTCRGGRGGGATGCCCTCCTTGTCCTGGATCTTC 684
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | ||||| | ||| || | ||||||||| || |||||
Sbjct 683 TGCTTSACGTTCTCGATSGTGTCRSWKGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 624
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 623 AGGGTCTTCACGAAGATCTGCATT 600
>seq221835
Length=4727
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 2203 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 2262
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || ||| | |||||| ||||| || | |
Sbjct 2263 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 2322
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | ||||||| || ||| || | ||||||||| || |||||
Sbjct 2323 TGCTTGACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 2382
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 2383 AGGGTCTTCACGAAGATCTGCATT 2406
>seq209501
Length=1560
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/204 (71%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||||| || | ||||||| | ||
Sbjct 1016 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 957
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|||||||| | || || ||||| ||||| ||| | |||||| ||||| || | |
Sbjct 956 TTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTC 897
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||||||| || ||| || | |||||| || | | ||
Sbjct 896 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATTGTCT---CCGTG 840
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 839 AGGGTCTTCACGAAGATCTGCATT 816
>seq220036
Length=2680
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | ||| | ||||||| | ||
Sbjct 104 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 163
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| || | |||||| ||||| || | |
Sbjct 164 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 223
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | ||||||| | ||| || | ||||||||| || || |||
Sbjct 224 TGCTTGACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTC 283
Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || || || || ||||| ||
Sbjct 284 AGGGTCTTCACGAAGATTTGCATGTT 309
>seq209919
Length=3227
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||||| ||| ||||||| | ||
Sbjct 2339 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGC 2280
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| || | |||||| ||||| || | |
Sbjct 2279 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 2220
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | ||||| | ||| || | ||||||||| || |||||
Sbjct 2219 TGCTTCACGTTCTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 2160
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||||
Sbjct 2159 AGGGTCTTCACGAAGATCTGCATT 2136
>seq207513
Length=1179
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||| |||| ||| | ||||||| | ||
Sbjct 1007 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGC 948
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| ||| | || || ||||| ||||| || | |||||| ||||| || |
Sbjct 947 TTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTT 888
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | |||||| | ||| || | ||||||||| || || |||
Sbjct 887 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTC 828
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || || ||||||
Sbjct 827 AGGGTCTTCACGAAGATTTGCATT 804
>seq177117
Length=2010
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||| | ||| ||||||| | ||
Sbjct 1447 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 1388
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| || || || | |||||| ||||| ||| |
Sbjct 1387 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGAATCTTT 1328
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||||| | | | |||||| | ||| || | ||||||||| || |||||
Sbjct 1327 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 1268
Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936
|| || ||||| || || ||||||
Sbjct 1267 AGGGTCTTGACGAAGATTTGCATT 1244
>seq215275
Length=6875
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | || | ||||||| | ||
Sbjct 4224 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 4165
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| |||||| || | |||||| ||||| || | |
Sbjct 4164 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTC 4105
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | ||||||| || ||| || | || || || || |||||
Sbjct 4104 TGCTTGACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTA 4045
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 4044 AGAGTCTTGACGAAGATCTGCAT 4022
>seq212599
Length=1576
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| ||| |||| ||||| ||||||||||| || |||||||||||||||
Sbjct 1250 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1309
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821
| || ||||||| | || ||||| ||| | || || ||||| |||||
Sbjct 1310 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 1362
>seq205002
Length=2607
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| ||| |||| ||||| ||||||||||| || |||||||||||||||
Sbjct 2312 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2253
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821
| || ||||||| | || ||||| ||| | || || ||||| |||||
Sbjct 2252 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 2200
>seq201539
Length=2797
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| ||| |||| ||||| ||||||||||| || |||||||||||||||
Sbjct 327 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 268
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821
| || ||||||| | || ||||| ||| | || || ||||| |||||
Sbjct 267 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 215
>seq201538
Length=2640
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| ||| |||| ||||| ||||||||||| || |||||||||||||||
Sbjct 296 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 355
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821
| || ||||||| | || ||||| ||| | || || ||||| |||||
Sbjct 356 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 408
>seq216265
Length=25441
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| |||||||||||||| || |||||||||||||||| ||| ||||||| | ||
Sbjct 16284 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCCCCCGTCCTCGAGCTGC 16343
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| || | |||||| ||||| || | |
Sbjct 16344 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 16403
Query 16853 TGCTTCAC 16860
||||||||
Sbjct 16404 TGCTTCAC 16411
>seq211431
Length=3216
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| ||||||||||||||||||| ||| | ||||||| | ||
Sbjct 462 TGGAGGGTGGACTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 403
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| ||||| | || || ||||| ||||| || | ||||| ||||| || | |
Sbjct 402 TTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 343
Query 16853 TGCTTCAC 16860
||||||||
Sbjct 342 TGCTTCAC 335
>seq205385
Length=4569
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801
|| ||||| || |||||||||||||||| | || ||||||| | || ||||| ||
Sbjct 2573 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 2632
Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860
| || || ||||| | ||| ||||||||||| |||||| ||| || |||||||||
Sbjct 2633 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 2691
Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920
| || ||||||||| |||| || | ||||| || || | ||| | ||
Sbjct 2692 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 2751
Query 16921 GACAAAAATCTGCATTT 16937
|| || || |||||||
Sbjct 2752 CACGAAGATTTGCATTT 2768
>seq199366
Length=4060
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801
|| ||||| || |||||||||||||||| | || ||||||| | || ||||| ||
Sbjct 3189 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 3248
Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860
| || || ||||| | ||| ||||||||||| |||||| ||| || |||||||||
Sbjct 3249 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 3307
Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920
| || ||||||||| |||| || | ||||| || || | ||| | ||
Sbjct 3308 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 3367
Query 16921 GACAAAAATCTGCATTT 16937
|| || || |||||||
Sbjct 3368 CACGAAGATTTGCATTT 3384
>seq199365
Length=4066
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801
|| ||||| || |||||||||||||||| | || ||||||| | || ||||| ||
Sbjct 3195 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 3254
Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860
| || || ||||| | ||| ||||||||||| |||||| ||| || |||||||||
Sbjct 3255 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 3313
Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920
| || ||||||||| |||| || | ||||| || || | ||| | ||
Sbjct 3314 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 3373
Query 16921 GACAAAAATCTGCATTT 16937
|| || || |||||||
Sbjct 3374 CACGAAGATTTGCATTT 3390
>seq198112
Length=3947
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801
|| ||||| || |||||||||||||||| | || ||||||| | || ||||| ||
Sbjct 1375 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 1316
Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860
| || || ||||| | ||| ||||||||||| |||||| ||| || |||||||||
Sbjct 1315 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 1257
Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920
| || ||||||||| |||| || | ||||| || || | ||| | ||
Sbjct 1256 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 1197
Query 16921 GACAAAAATCTGCATTT 16937
|| || || |||||||
Sbjct 1196 CACGAAGATTTGCATTT 1180
>seq182744
Length=3799
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801
|| ||||| || |||||||||||||||| | || ||||||| | || ||||| ||
Sbjct 1227 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 1168
Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860
| || || ||||| | ||| ||||||||||| |||||| ||| || |||||||||
Sbjct 1167 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 1109
Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920
| || ||||||||| |||| || | ||||| || || | ||| | ||
Sbjct 1108 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 1049
Query 16921 GACAAAAATCTGCATTT 16937
|| || || |||||||
Sbjct 1048 CACGAAGATTTGCATTT 1032
>seq96961
Length=190
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| |||||||||||||| || |||||||||||||||| || | ||||||| | ||
Sbjct 132 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 73
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| ||| | || || ||||| ||||| ||| | ||||| ||||| || | |
Sbjct 72 TTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 13
Query 16853 TGCTTCAC 16860
||||| ||
Sbjct 12 TGCTTGAC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403979730121180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |