Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq211828 556 2e-153 seq207413 421 1e-112 seq203897 421 1e-112 seq203896 421 1e-112 seq199157 421 1e-112 seq178273 114 2e-20 >seq211828 Length=4713 Score = 556 bits (616), Expect = 2e-153 Identities = 979/1418 (69%), Gaps = 71/1418 (5%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTT 243795 ||| ||||||||| || || | |||||| | ||| | |||||||||||||||||||| Sbjct 2009 ACGGTGAACTGGATCGCGTTGG-CGGCGGGCCGGGTGCGAAGGTAGTACATGCCGGTCTT 1951 Query 243796 GAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGG 243855 ||| || || |||||||| || |||||| | || ||||| | | ||| | Sbjct 1950 GAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAAC--GAG-----G 1898 Query 243856 GTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTC 243915 | ||||| || ||| |||||| |||||||||||||||| | ||| || || || Sbjct 1897 G-----CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATC 1843 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 ||||||||| ||||| | | ||| | | ||| || | |||||||| | ||| Sbjct 1842 GGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTGTACAGCTTCTT 1783 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||||| | | |||||| ||| |||||||| ||||| || ||||| | | Sbjct 1782 GATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAGACGAGCTTGTT 1723 Query 244036 -----GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAG---GTGC 244087 |||| | | ||| ||||| ||||| | | |||| ||| |||| Sbjct 1722 CTTGAGCGCGGGCGA-----CCAGAGGCC---GCGCTGCTGGAGCTCGCGCAGAAGGTGC 1671 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||| || || || || || | || | |||||| ||||| |||| | || Sbjct 1670 TCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAG 1611 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||| | || ||| |||||||||| ||||||| || || || |||||||||| | Sbjct 1610 GGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCC 1551 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 || || || ||| | || |||||| |||| | | |||| | ||||||| Sbjct 1550 ACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCC 1491 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 ||| || |||| | | || |||||| | ||| ||| ||| |||||| Sbjct 1490 CACCTGTCCGACGGCAC---------GACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTG 1440 Query 244328 CTGACG-GGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGC 244385 |||| |||| ||||||||||||| |||||| || ||| ||| || |||| | Sbjct 1439 --GACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTC---GT 1385 Query 244386 TCTCGTCGA---GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGG 244442 || | ||| |||||||||||||||||||||||||||| ||| | ||||||| Sbjct 1384 TCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCGGTTGAGCTCGCGGG 1325 Query 244443 CCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGC 244502 ||| | ||| | ||| || ||| |||||||||||||||||||| |||||||| | Sbjct 1324 CCTCGTCGCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTC 1265 Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562 ||||||||||||| ||||| ||| |||| ||| ||| |||||||||||||| ||| Sbjct 1264 CGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCACGGGGTAGTAGT 1205 Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT 244622 || ||||||||||||||||||||| ||||| || ||||||||| |||| || Sbjct 1204 TGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 1145 Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682 | ||| ||||| || ||||||| |||| | || |||| Sbjct 1144 GGTGGTCAAACTCGC------------CGTTGGTGATG------AACTTGGGCAGCGCGA 1103 Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742 |||||||||||| ||||||||||| || | ||||||||||| | ||| |||| Sbjct 1102 GCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGC 1043 Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802 | ||||| ||| ||||||||| |||||||| || ||||||||| |||||||||||| Sbjct 1042 ACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGT 983 Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862 ||||||| |||||| ||||| |||||||||| ||| | |||||| | | ||| | Sbjct 982 CCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACA 923 Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | ||| ||||||||| | ||| || |||||| ||||||||| |||| Sbjct 922 GCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCT 863 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG--CACGACGCCGGGCACATGAG 244980 |||||||||| |||||| ||| ||||||||| | || | ||||| | ||| Sbjct 862 CCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTG--GGGCAAAAGAG 805 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 ||| |||||||| || || | || |||||| |||||||| ||||| ||| | | Sbjct 804 CGACCAGTCGCCGCCCGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTA 745 Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100 |||||| || | || | | ||| ||| ||| ||||||| |||| || | ||||| Sbjct 744 GAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTC 685 Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGA 245138 ||||| ||| ||||||||||||| | ||||| |||| Sbjct 684 AAAGATGTCCGCGTGCCAGGGCTCGAGGTAGATGGCGA 647 Score = 168 bits (186), Expect = 1e-36 Identities = 254/354 (72%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 |||||||| |||||||||||||||||| ||||| |||||| |||||||| || Sbjct 406 CCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATC 347 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 |||| ||||||| ||||||| ||||| || |||||||| || ||| ||| | | Sbjct 346 GAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCG 287 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCTG 245466 ||||| || || ||| |||||||||| ||| ||| ||| ||| | || |||| |||| Sbjct 286 TTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGTAGGTCTC 228 Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCT 245525 || || ||| ||||||||| ||| | | ||| ||| | |||||| |||||| Sbjct 227 GATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCT 169 Query 245526 GGGGCGTCTCGATGGGTCCCTCGGGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||| ||||| | | | ||| || ||| | ||||||||||||||| ||||| Sbjct 168 GGGGTCGCTCGA--CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTT 111 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 ||| |||||||| | |||| |||||| | || | ||| || || ||||| Sbjct 110 GAAGCCAAAGTAGGTGTAGTTGAAGTCGCGCTCGTACTTGATCGCGGCCTCGAG 57 >seq207413 Length=2163 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 1022 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 963 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 962 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 903 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 902 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 843 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 842 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 783 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 782 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 723 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 722 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 663 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 662 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 604 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 603 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 544 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 543 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 485 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 484 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 428 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 427 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 369 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 368 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 309 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 308 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 255 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 254 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 195 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 194 TTCGAACGCCGCGTCGGCGAGTAC 171 >seq203897 Length=2989 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 2640 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 2581 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 2580 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 2521 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 2520 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 2461 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 2460 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 2401 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 2400 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 2341 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 2340 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 2281 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 2280 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 2222 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 2221 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 2162 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 2161 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 2103 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 2102 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 2046 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 2045 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 1987 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 1986 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1927 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1926 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1873 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1872 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 1813 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 1812 TTCGAACGCCGCGTCGGCGAGTAC 1789 >seq203896 Length=2920 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 2571 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 2512 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 2511 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 2452 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 2451 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 2392 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 2391 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 2332 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 2331 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 2272 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 2271 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 2212 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 2211 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 2153 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 2152 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 2093 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 2092 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 2034 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 2033 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 1977 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 1976 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 1918 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 1917 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1858 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1857 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1804 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1803 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 1744 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 1743 TTCGAACGCCGCGTCGGCGAGTAC 1720 >seq199157 Length=2194 Score = 421 bits (466), Expect = 1e-112 Identities = 617/864 (71%), Gaps = 24/864 (3%) Strand=Plus/Plus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 1173 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 1232 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 1233 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 1292 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 1293 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 1352 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 1353 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 1412 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 1413 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 1472 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 1473 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCTGTCAAGAAGAAG 1532 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 1533 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 1591 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 1592 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 1651 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 1652 GCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 1710 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 1711 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 1767 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 1768 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 1826 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 1827 GTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 1886 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 1887 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 1940 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 1941 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 2000 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 2001 TTCGAACGCCGCGTCGGCGAGTAC 2024 >seq178273 Length=18186 Score = 114 bits (126), Expect = 2e-20 Identities = 245/362 (68%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 243875 AGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGG 243934 ||||||||| ||||||||||||||| | ||||||| || || | |||||| ||||| Sbjct 7080 AGGTTGAGGAACTGGCTCTGGTCGATGTAGGGCGCGCGATCCTCCGCCATGTCAATGAGC 7021 Query 243935 TCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 | || || ||||| || | |||||||| | |||||| || | || | | | Sbjct 7020 ACACGTTGCGAGATCTCCCACACGGTCTTGTATCTCAGCTTGACGTCGGCAGGCAGCTCG 6961 Query 243995 TCGATGTTCTGCACCGAGCC---CTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051 |||| | |||| ||||| || | | ||||||| | | | || | | | | | Sbjct 6960 TCGAAGGTCTGGACCGAACCTCGCGCGCCGACGATGCGGTAGTTGAGT---TCAGCCAAC 6904 Query 244052 CACAGGCCCAAGCGCTCCA-GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 ||||| |||| ||| | | || || || ||||| ||| | | ||| || || Sbjct 6903 CACAGTCCCA-GCGAACGAAGCTCCCTCACGAGGTGGAGGTTGATCTGGACAAAGTCGCC 6845 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||| ||||| |||||| || ||| ||||||||||| |||||| Sbjct 6844 AGCGCTGACCCGTCGCGTGTAGATGTTGCTCGTGTACGGTTCGATGCTCTCGACGTTGCC 6785 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 ||||||||||| ||| ||| || |||||||| | | |||||| |||||||| ||| Sbjct 6784 CAGTATCTGCGAGGTGGACGCCGTGGGCATGGGGGCCGTCAGCAGGGAGTTCCTCATGCC 6725 Query 244231 GT 244232 || Sbjct 6724 GT 6723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941689360596320