Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq211828 226 3e-54 seq207413 105 8e-18 seq203897 105 8e-18 seq203896 105 8e-18 seq199157 105 8e-18 seq216572 98.7 1e-15 seq185390 89.7 6e-13 seq221322 82.4 9e-11 >seq211828 Length=4713 Score = 226 bits (250), Expect = 3e-54 Identities = 876/1359 (64%), Gaps = 32/1359 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || |||||||| |||| |||||| || | |||||||||| Sbjct 1973 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 1914 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 1913 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 1854 Query 113717 CGTCCA-CGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775 | | | ||||| || ||||| || || | | | | || |||||||| || | Sbjct 1853 -GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTT 1795 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| || ||||| || || || ||||| ||| |||| |||| ||||| | Sbjct 1794 GTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGA 1735 Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 113895 ||| | | ||| | | |||||||| || || | ||| || || || Sbjct 1734 GACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAG 1675 Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGT 113955 |||| ||||| || || || || |||||| |||| | ||||| |||||||| Sbjct 1674 GTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGT 1615 Query 113956 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGG 114015 ||| |||||||||||||| ||||| |||| ||| || | ||| ||||| ||||||||||| Sbjct 1614 GTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGG 1555 Query 114016 TGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCA 114075 |||| ||| || ||| || ||||| | | ||| | ||| | | |||| Sbjct 1554 CGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCA 1495 Query 114076 GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGC 114135 ||| | || | | | | | ||| | || |||||| | || | ||| || Sbjct 1494 GTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGC 1435 Query 114136 TGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGC 114192 ||||| ||||| | |||| ||| | |||||| |||| ||| | ||| ||| || Sbjct 1434 GGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GC 1378 Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTCGT 114251 | ||||| |||| || || ||||| || || ||| | || | | |||||||| Sbjct 1377 GACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCTCGT 1319 Query 114252 CGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311 || || ||| | | || | || || || || || || || || || |||| || Sbjct 1318 CGCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGC 1259 Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCC 114368 | || || | || | ||| || || || || || ||| |||||| || | || Sbjct 1258 CGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGTTGA 1202 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 | ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 1201 TGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGT 1142 Query 114429 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 114488 || ||||| || | | ||| |||| || || |||| || ||||| || | Sbjct 1141 GGTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGC 1088 Query 114489 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 114548 |||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 1087 ACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACT 1028 Query 114549 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 114608 |||||||| | || || || || ||||| ||| || || |||||||| ||||||| Sbjct 1027 GGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGT 968 Query 114609 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGG 114666 | ||||| || ||||| | || |||| ||| || || ||| | || ||| || Sbjct 967 AGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGA 908 Query 114667 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT-CTT 114725 | | |||| || || ||||||| |||||| ||| | || |||| ||| Sbjct 907 CCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTT 850 Query 114726 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 114785 ||||| | || | || || || |||| | ||||| ||||| ||||| | || | Sbjct 849 GCCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGC 791 Query 114786 CCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGAC 114845 || ||| || ||||||||||| ||||| || ||||| || | |||||||||| || Sbjct 790 CCGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCG-- 733 Query 114846 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 732 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 673 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 |||||| || || ||||| | |||| | ||||| || Sbjct 672 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 634 Score = 129 bits (142), Expect = 7e-25 Identities = 178/249 (71%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 || || || || ||| |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 412 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 353 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 352 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 293 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 115249 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 292 CCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 233 Query 115250 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 115309 ||||| | |||||||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 232 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 173 Query 115310 TATTGGGGT 115318 | |||||| Sbjct 172 TGCTGGGGT 164 >seq207413 Length=2163 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 282 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 341 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 342 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 401 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 402 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 458 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 459 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 517 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 518 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 577 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 578 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 636 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 637 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 695 >seq203897 Length=2989 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1900 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1959 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1960 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 2019 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 2020 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 2076 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 2077 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 2135 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 2136 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 2195 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 2196 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 2254 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 2255 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 2313 >seq203896 Length=2920 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1831 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1890 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1891 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 1950 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 1951 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 2007 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 2008 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 2066 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 2067 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 2126 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 2127 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 2185 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 2186 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 2244 >seq199157 Length=2194 Score = 105 bits (116), Expect = 8e-18 Identities = 280/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Minus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 |||||| || || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 1913 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1854 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1853 GAGGGCCACGGGGAGCGACTCGGTCACGAATTCCTTCTCAATCTCGACGGCCTCGAGGAT 1794 Query 125989 GATG-GCGTGA-ATGGT--GTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| || || | || ||| | | || | | ||| || | || ||| || Sbjct 1793 GATCTGCTTGGGAACGTCGGTCGAGGGCTTGTTGAC-GAGCATGGTGTAGAGGAGG--CA 1737 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || |||||| ||||| || ||| ||| | || || |||| || | Sbjct 1736 -GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGC 1678 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | |||||||| || |||||||| | |||||| || | || || || |||||||||| Sbjct 1677 CGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGA 1618 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA----CTTTGTG 126220 | ||||| || ||||| | | ||||||||| || |||| | ||| || || Sbjct 1617 TGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGG-TCTCGACGCCCTCCTTG 1559 Query 126221 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||||||||||||| | ||||| |||| || | | || ||||||| ||| || Sbjct 1558 TTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGC 1500 >seq216572 Length=10235 Score = 98.7 bits (108), Expect = 1e-15 Identities = 183/266 (69%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 29579 CGGACATCTCAACTACGAGCTTCTATGCGAGTCACGTCATCACAGCGGGTGGCGTTGGTG 29638 |||||||||| || || |||||||| ||| ||| ||||||| ||| | ||| || | Sbjct 5535 CGGACATCTCGACGACCAGCTTCTACGCGTCCCACATCATCACGGCGTGCGGCTCGGGCG 5476 Query 29639 GCATGGTCATGTTCAATGACGATGCTCATCTCAAGCGAGCTCTCATGTTTAGGGATTGGG 29698 |||||||||||||||| || | |||||||| || |||| | || |||| Sbjct 5475 GCATGGTCATGTTCAACTCGGAGAGGTACCTCAAGCGCGCGACGATGTACCGCGACTGGG 5416 Query 29699 GGCGTATCGGTGACAATATTGAGGAGCCAAGTGAACGCTTCAACCACTCCGTTGATGGCA 29758 | || ||||| ||||| ||| || || ||||||| | | || || || | Sbjct 5415 GTCGGATCGGCGACAACGCCGAGAAGGTGGAGGAGCGCTTCACCGAGGTGGTCGACGGGA 5356 Query 29759 TCCCCTACGACTGGAAGTTCCTCTATGGTGTCGCCGGG-TATCACCTCAAGGCGTGTGAG 29817 || | |||||| ||||||||||| || || || ||| || || ||||| | ||| Sbjct 5355 TCTCGTACGACACCAAGTTCCTCTACGGCGT-GCTGGGCTACAACTTCAAGAGCAGCGAG 5297 Query 29818 ATGAATGCCGCATTTGGTCTCGTCCA 29843 | || ||||| ||||| || ||||| Sbjct 5296 GTCAACGCCGCGTTTGGGCTGGTCCA 5271 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 29086 AAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATTAAAGCC 29145 ||||| |||| || || |||||| ||||| | || |||||| || || || ||| Sbjct 6073 AAGAAGGTGTACTACGCCCCCAACGGCTTTGAGGCCTACGGGGAGCTCGAGATCAAGGCC 6014 Query 29146 GTTGAGGCTTGCCTTCGAGATGGCTGGCTCGCTGGCTTTGGTGATCGCA-CTATGGAGTT 29204 || |||| |||| | ||| ||||||||||| |||||||| | || | | || || Sbjct 6013 GTCGAGGATTGCTTGCGAAGCGGCTGGCTCGCCGGCTTTGGAAACTACACCCAACGA-TT 5955 Query 29205 TGAGAAGAGGGTGGCCGACACATTCGGAAAGAGACACGGACTCTTTGTAAACTCCGG 29261 ||||||||||| |||| | || || |||| |||| || ||||| ||||| || Sbjct 5954 CGAGAAGAGGGTCGCCGGCCTCTTTGGCAAGAAGTACGGCCTGTTTGTCAACTCGGG 5898 >seq185390 Length=25718 Score = 89.7 bits (98), Expect = 6e-13 Identities = 293/439 (67%), Gaps = 26/439 (6%) Strand=Plus/Plus Query 10726 GGCGTGGACACCCAAAATCTTCTCGCGACCGCGCACACTGGG--TAGGGACACGGTGATC 10783 ||||||||| || ||||||||||| || | ||| | |||||| | ||| Sbjct 20202 GGCGTGGACCGACAGGATCTTCTCGCGGCCCTTGATGTCGGGGTTCGGGACATAG--ATC 20259 Query 10784 TTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTC 10843 | || || |||||||| ||||| || || || ||| || | || ||||||| || Sbjct 20260 TGGCGGTCGAAGCGACCGGGGCGCAGCAGCGCCGGGTCCAGCACGTCCTTGCGGTTGGTT 20319 Query 10844 GCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGT 10900 || ||||||| | || ||| ||||| || ||||| ||||| || || | Sbjct 20320 GCGGCGATGATGATGACGCCT---TCGTTGGCGTCGAAGCCGTCCATTTCCACCAGCAAC 20376 Query 10901 TGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGC-ATACC-AC-CCGCACTGCGTT 10955 || || | || ||||||||||| || || ||| | | || || || |||| | ||| Sbjct 20377 TGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCGATGCCGACGCCGCGC-GCGCG 20435 Query 10956 GCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTT--GATTTTCACGGGC 11013 || |||| ||||| || || |||||||| ||||| || || ||||| | || | Sbjct 20436 GC----CGACCGCGTCGATCTCGTCGATGAAGACGATGCAGGGGGCCGATTT-CTTGGCC 20490 Query 11014 AACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATT 11073 || | || || || ||||| | || ||||| || || ||||| || || || | Sbjct 20491 TGCT-CGAACATGTCGCGGACACGGGACGCGCCGACGCCGACGAACATCTCGACGAAGTC 20549 Query 11074 GGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGA 11132 | | || || | || |||||| ||| | || ||||||||||| ||||| || | Sbjct 20550 CGAACCCGAG-ATGGTGAAGAAGGGTACGCCCGCCTCGCCCGCGATGGCGCGGGCAAGCA 20608 Query 11133 GGGTCTTCCCCGTCCCAGG 11151 | ||||| |||||||| || Sbjct 20609 GCGTCTTACCCGTCCCGGG 20627 >seq221322 Length=69654 Score = 82.4 bits (90), Expect = 9e-11 Identities = 275/423 (65%), Gaps = 4/423 (1%) Strand=Plus/Minus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| ||||| | || |||| ||||||||||| ||||| || | ||||| ||| Sbjct 68808 AACCGGTGCCCACGCCATCGGCTCCGTTCACGAGCACCATCGGCACGACTGGCAAGTAGT 68749 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 || || || | || || ||||| || | |||| ||| | |||||| || Sbjct 68748 AGCGGGGCTCGACCGGGATGCCGTCATCGTCGAGGTAGTCGAGGATCTTGTCGTCGTCCG 68689 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 171905 ||| |||||| | |||| | | || ||| ||||||||| | | || Sbjct 68688 GATGAAAGATGGTGCGAGTGATGGCGCTCAGGCGCGTGTGGATGTACCTGGCGCTGGCCG 68629 Query 171906 CATCTTTGCCACCCATGAGACGCGTCCCAAA-TTGACCACACGGTTCAAGGAGATTGATA 171964 | || | |||||| ||| || | || || ||| || | ||| | || || ||||| Sbjct 68628 CGTCCCTTCCACCCCGGAGGCGGCTGCCGAAGTTGCCCGC-CGGGTGGAGCAGGTTGATG 68570 Query 171965 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 172024 ||||| || |||| |||| || |||| | ||| || || | ||| || |||| Sbjct 68569 TTGTTGGAGCCCACAAAGTCGTTCGCCATCCCGACGATGGTCTTGTTGAGAGATTCTTCG 68510 Query 172025 CCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGC-CAACTGTGCCACCTTCATCTC 172083 ||||| ||||||||||| | | ||| | |||| || || |||||| | ||||| Sbjct 68509 CCGTGGTGGTAGGCCGAGTGCAGGGAGACCGA-ACCGCTCAGTTGGGCCACCCTAATCTC 68451 Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCC 172143 || ||||| ||||| | ||| | | | |||||| | ||| ||||||||||| Sbjct 68450 CTCGCTGAGGGCCTTGTCCAGGCAGGTGAAGAGGACCTTGCGCTGGCCGGGCTTGAGGCC 68391 Query 172144 GTC 172146 ||| Sbjct 68390 GTC 68388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595677410864560