Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq179470 86.0 8e-12 >seq179470 Length=35510 Score = 86.0 bits (94), Expect = 8e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737 ||| |||||| |||||||||| |||| ||||||||||||| || ||| |||| | Sbjct 22956 GGAGGAGTGGCAGAGTGGTTTAATGCACCGGTCTTGAAAACCGACGTGGGGGCAACCCCA 22897 Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764 |||||||||| ||||||||||| |||| Sbjct 22896 CCGTGGGTTCGAATCCCACCTCCTCCG 22870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608684011319280