Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq211828 365 8e-96 seq207413 268 2e-66 seq203897 268 2e-66 seq203896 268 2e-66 seq199157 268 2e-66 >seq211828 Length=4713 Score = 365 bits (404), Expect = 8e-96 Identities = 930/1394 (67%), Gaps = 77/1394 (6%) Strand=Plus/Minus Query 212585 GGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGC 212644 |||||| || ||||||||||||||||| |||||||||| |||| ||| | |||||| | Sbjct 1977 GGTGCGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGA 1918 Query 212645 TGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG--GTTCAGG 212702 ||||| || || | | || |||| |||| ||||| ||| || Sbjct 1917 GGTGAGCTTG----GCAAACGAG---GG-----CTCG---CCCA--TGTAGACGTTGAGC 1875 Query 212703 GACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGG 212762 ||||| |||||||| ||| | | | | || ||||||||||| ||||| | | ||| Sbjct 1874 GACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGC 1815 Query 212763 GAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTC 212822 | ||||||||||||||||||| | | | |||| ||| || |||| | |||| | Sbjct 1814 GGGAGCTCCCACACGGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGC 1755 Query 212823 TGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTC---CAGAGGCCC 212879 || || || || |||| | |||| | | || | || | |||||||| Sbjct 1754 TGGACCGAGCCGTTGTGCGAGACGAGCTT---GTTCTTGAGCGCGGGCGACCAGAGGCCG 1698 Query 212880 CTGGTCTCCAGGCACTTGACCAG---GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGC 212936 | || | || || | ||| ||| |||||| | |||||| || | ||| Sbjct 1697 CG---CTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGG 1641 Query 212937 ACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATC 212996 | | | ||| | ||| | ||||||||||| | || ||||||||| ||||| ||| Sbjct 1640 ATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATC 1581 Query 212997 TGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCG 213056 || | || ||| ||||||||||| ||||| ||||| ||| | || ||||||| | Sbjct 1580 TGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGG 1521 Query 213057 CCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCAC 213115 ||||| ||||| || || ||||||||||| ||| | ||| | | || || Sbjct 1520 GCGATGTTGGCGCGGA-GCGTGGCCCAGTCCCACCTGTCCGACGG---CACG------AC 1471 Query 213116 GTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTA 213175 | ||| | ||| ||| | |||| ||| | |||| ||||| ||| | ||| Sbjct 1470 GCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTA 1411 Query 213176 GGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTC 213235 || ||| | ||| || |||||| || || |||||| |||||||||||||| || Sbjct 1410 GGTGCCCTCGACCTGCGCGAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTC 1351 Query 213236 AAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCAT 213289 || || | | |||||||| |||||| | ||| | | |||| ||||| Sbjct 1350 GAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCATGATCAT 1291 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 | || || || ||||| ||||| || |||||||||||||| ||||| | || ||| Sbjct 1290 G------AAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTT 1237 Query 213350 AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || ||| | ||| || |||||| ||||| |||||| | |||||||||||| Sbjct 1236 CGAGTTGCGGGCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 1177 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 |||| |||| || ||| | | ||| | || ||| | ||| || |||| Sbjct 1176 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCG------CCGTTGGT 1123 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTG 213528 | |||| ||||| |||| |||||||||||| ||||||||||| | | | | | | Sbjct 1122 GATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGAC-G 1064 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 |||||| | || ||| ||||||||||| | |||||||||| |||| ||| |||| Sbjct 1063 TGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGT 1004 Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 | ||||| ||||| | |||||||| ||||||||||| | |||||||| | ||| | Sbjct 1003 TGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCG 944 Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTC-CGGGC 213707 || | || || | ||| || | | |||||||||||| || | || | ||| | Sbjct 943 ACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGC-----GCGCGCGGCC 889 Query 213708 GT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTC 213765 | |||||| | ||||| ||| | ||| || | |||||| || | | ||| | Sbjct 888 CTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTC-GAACAGGC 830 Query 213766 C--CGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCA 213822 | || | | | ||| || | ||| |||||| ||| | |||| || | || || Sbjct 829 CGGGGGCCTCGTT--GGGGCAAAAGAGCGACCAGTCGCCGCCCGTCTC-CACGCGCTTCA 773 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 |||||||||| || | |||||| || ||| || || | || | |||| ||| | Sbjct 772 TGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGC 713 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | ||| || ||| || || ||||||||||||||||||||||| ||||| | ||||| Sbjct 712 CGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCGAGGTAGA 653 Query 213943 TGGCAAAGGCGCCC 213956 |||| || || ||| Sbjct 652 TGGCGAAAGCACCC 639 Score = 138 bits (152), Expect = 2e-27 Identities = 284/417 (68%), Gaps = 4/417 (1%) Strand=Plus/Minus Query 213995 GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 |||| ||| ||| || | ||| | || |||||||| |||||||| || || || Sbjct 506 GTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGTA 447 Query 214055 CGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGAT 214114 |||| |||||| | | | | | || ||| || ||||| ||||| |||||||||| Sbjct 446 CGAGTTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCCGACTTGGAGAT 387 Query 214115 CATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAG 214174 | |||||| || | | || || |||||| | || ||| || | | | | || Sbjct 386 GAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAG 327 Query 214175 CAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234 || |||||| ||| ||||| || | | | ||| | |||||| ||||| ||| |||| Sbjct 326 CAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCGTCGGGGTGGC 267 Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294 ||| | | | || | || | ||| ||||||||| | || | |||||||| || Sbjct 266 GTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTC 207 Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353 |||||| | | || ||| | ||| |||||||||||||| | ||| | | || | Sbjct 206 CTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCTGGGGTCGCTCGACGA-TCTTG 149 Query 214354 TGGG-GCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 | | || ||| |||||||||||||| || |||||||| |||||||||| |||| Sbjct 148 CCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGGTGTAG 92 >seq207413 Length=2163 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 190 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 249 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 250 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 308 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 309 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 368 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 369 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 425 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 426 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 482 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 483 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 542 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 543 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 602 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 603 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 659 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 660 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 716 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 717 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 776 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 777 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 836 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 837 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 895 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 896 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 955 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 956 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 1014 >seq203897 Length=2989 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 1808 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1867 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1868 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1926 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1927 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 1986 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 1987 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 2043 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 2044 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 2100 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 2101 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 2160 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 2161 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 2220 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 2221 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 2277 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 2278 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 2334 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 2335 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2394 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 2395 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 2454 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 2455 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 2513 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 2514 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 2573 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 2574 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 2632 >seq203896 Length=2920 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 1739 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1798 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1799 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1857 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1858 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 1917 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 1918 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 1974 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 1975 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 2031 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 2032 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 2091 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 2092 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 2151 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 2152 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 2208 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 2209 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 2265 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 2266 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 2325 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 2326 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 2385 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 2386 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 2444 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 2445 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 2504 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 2505 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 2563 >seq199157 Length=2194 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Minus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 2005 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 1946 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 1945 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 1887 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 1886 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCGGTCAC 1827 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 1826 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 1770 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 1769 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 1713 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 1712 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAG 1653 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 1652 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 1593 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 1592 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 1536 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 1535 GGCCTTCTTCTTGACAGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 1479 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 1478 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 1419 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 1418 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 1359 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 1358 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 1300 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 1299 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 1240 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 1239 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928918895674880