Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq208634 86.0 2e-12 >seq208634 Length=57299 Score = 86.0 bits (94), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 43936 TTGTCGCGCTTGCGGATACCGATGATCTTGCGGATGACTTTGACATCGTATCCACGGCCT 43995 |||||||||||||| | |||| | |||||| ||||| ||| || || || || | Sbjct 47644 TTGTCGCGCTTGCGCAGCGCGATCACCTTGCGCATGACCTTGGTGTCATAGCCGCGTGCC 47585 Query 43996 TTGGCCTCAGCCATAATCTCTTTCTGGCCTTCAACGATGTCTTTCTTCTCAACCTCAAGC 44055 |||||||| ||||| | || ||||| | || | | || ||||| || |||| ||| Sbjct 47584 TTGGCCTCGGCCATCAGTTCCTTCTGACGCTCGGCCACATCCTTCTTTTCGGCCTCGAGC 47525 Query 44056 CGCTCATAGCGTTCGATGAACTGGCGCAGTTCCTCGCCCGC 44096 |||| | | ||||||||||||||||| |||||| || Sbjct 47524 TGCTCGAACTGCTCGATGAACTGGCGCAG---CTCGCCTGC 47487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181658454413280