Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq196771 114 2e-20 >seq196771 Length=22834 Score = 114 bits (126), Expect = 2e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 99015 GGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCATGAACTGCT 99073 || || |||||||| ||||| || | ||| ||||| || || |||| |||||||| Sbjct 19687 GGCTTTCCGCTGGTCACGACGAAAAAGCTGC-ACCTGAAATCCATCGTCCACGAACTGCT 19745 Query 99074 GTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATTTG 99133 |||||||||| |||||||| || |||| || ||| | | || || || | ||| || Sbjct 19746 GTGGTTCCTGTCGGGCGACACGAACATCCGCTATCTGCAGCAGAACGGCGTCAGCATCTG 19805 Query 99134 GGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 |||||||||||||||| || ||||||||||| || || || || | |||||||| Sbjct 19806 GGACGAATGGGCGGACGCGAACGGCGACCTCGGCCCTGTCTATGGCCATCAGTGGCG 19862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714625899223280