Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq208634 592 6e-165 seq192533 239 2e-58 seq158040 185 3e-42 seq177236 156 1e-33 seq179236 113 2e-20 seq190645 109 2e-19 seq199262 107 6e-19 >seq208634 Length=57299 Score = 592 bits (656), Expect = 6e-165 Identities = 1226/1792 (68%), Gaps = 68/1792 (4%) Strand=Plus/Plus Query 38395 GATGAAGGTTACGAGCTACCGGAAATTGAGGTGCGCTGGCATGAGTTGCCCGCCGACCAT 38454 ||||| || || ||||| ||| | || ||||||||||| ||| ||||| |||| || Sbjct 41946 GATGAGGGCTATGAGCTGCCGCCGCTCGATGTGCGCTGGCACGAGCTGCCCACCGATCAC 42005 Query 38455 GCATCGGCCGGTACCG---AAAAGAGCGGGCAGGGCCGCCTTCTGCGCAATGCCGCAGCG 38511 || | | || ||| | || ||||| ||| ||| | | |||||||||| Sbjct 42006 GCCGCCGGCGCCGCCGTCGAGAAAAGCGGCCAGAAGCGCATGTTCAAGGATGCCGCAGCC 42065 Query 38512 TCTCTTTCCGACACC-GCAAGGGAGAAGCGCGACAGCCTTGGTATCCGCATTGCCAGGAT 38570 || ||||| | || | || |||||||| ||||| ||| | | | | | Sbjct 42066 GACCTG-CCGACCGCAGCGCGCGAAAAGCGCGAAAGCCTGCCCGCCCGGGTCGAGAAGCT 42124 Query 38571 GATGGAACTGCGCGCCGAAGACCCCGACGCGCACCGCATCATCTGGCACGATCTGGAGGC 38630 |||| | | |||||||||| ||| ||||||||||| |||||||||||||| || ||||| Sbjct 42125 GATGCAGATCCGCGCCGAAGGCCCGGACGCGCACCGGATCATCTGGCACGACCTCGAGGC 42184 Query 38631 TGAGCGGCTGGCGATCGAGGCTGCCATTCCCGACG-TGGTCAGCGTCTATGGCGCCCAGG 38689 ||||| |||| | || || || |||||| | | | ||||| ||| | || | Sbjct 42185 CGAGCGCGCGGCGCTGGAAAAGGCGAT-CCCGACCATCGCGACGGTCTACGGCTCGCAAG 42243 Query 38690 ACCTCGATGATCGTGAACAGTCGATCGTCGGTTTCTCGCATGGGCGCATCCGCGAAATCG 38749 |||| || | || || | ||||| | |||| | | |||| ||| ||| | | Sbjct 42244 ACCTTGACGCGCGCGAGACGCTGATCGGGGATTTCGCCGACGGGCTGGTCCAGGAACTGG 42303 Query 38750 CAGCCAAGCCCGTCATGCTCGGCTCGGGCTGCAATTTCCAGCGACATTGCTGGTGGGCAA 38809 ||||||||||| ||||| || || ||| ||| | ||||| |||||| ||| | Sbjct 42304 GCGCCAAGCCCGTGATGCTGGGGTCCGGCACCAACCTGCAGCGGCATTGCGCCTGGTCCG 42363 Query 38810 TCTTCCTCGGCATTGGTCACAAGTTCAATGACTTCATCCAGGCCGTTCACCGCATCCAGC 38869 | ||||| ||||| || ||||||||| |||||||||||||| || || || | | || Sbjct 42364 TGTTCCTGGGCATCGGCTTCAAGTTCAACGACTTCATCCAGGCGGTCCATCGGCTGCGGC 42423 Query 38870 GATTTCTCCAGA-CGC--ACAAAGTTCGCATCGACCTCATCTACACCGAAGCGGAACGAC 38926 | || |||| ||| ||| || || ||||| | ||||||||||| || || || Sbjct 42424 GCTTCGGGCAGATCGCCGACAGCGTGCGGCTCGACATGATCTACACCGAGGCCGAGCGCG 42483 Query 38927 CGGTGCGCGACAACCTCGAAGCCAAATGGCGACGCCACGTGGAGCAGATGG--CA-ATCA 38983 ||| ||| | || ||| ||||||||| | ||| ||| |||| || | | Sbjct 42484 AGGTCCGCCGCTCGCTAGAACGCAAATGGCGCCAGCACAACGAG---ATGGTTCAGAAGA 42540 Query 38984 TGACAGATATCATTCGCAAATATGGCCTGTCGTCTGCG-----GCGATGGCTGAAACCCT 39038 ||| || ||| | |||| ||||| | ||| || ||| | | || Sbjct 42541 TGATCGACATCGTCAAGGAATACGGCCT-----CAGCGAGATTGCCATGCAGCAGGCGCT 42595 Query 39039 CACGCGCGCCATGGGTGTTGAGCGGATCGAAGTTTGCGGCCCGGGCTATCGGCTG-GTCA 39097 |||||| |||| || |||||| |||| | | ||||||| |||||| ||| ||| Sbjct 42596 GGTCCGCGCCTTGGGCGTCGAGCGGGTCGAGGCCTCGGGCCCGGACTATCG-CTGCGTCC 42654 Query 39098 ACAATGATTGCGTGATGGAGTGCAAGAAGATGGGCTCCAA--CAGCGTTG-ACCTGATTG 39154 |||| || |||||| ||| | |||| || | | || || | ||||| | Sbjct 42655 ACAACGACTGCGTGGCCGAGACCCGCTCCATGG---CCGATGCCTCGGTGCAGCTGATCG 42711 Query 39155 TCACATCGATCCCGTTTTCCACCCAATACGAGTATTCGCCGAACTATGCCGACTTCGGTC 39214 |||| ||||||||||| |||||| ||||| || |||||||||||||||||||| | Sbjct 42712 TCACCTCGATCCCGTTCAGCACCCAGTACGAATACAGCCCGAACTATGCCGACTTCGGCC 42771 Query 39215 ATACCGAAGACAATGAGCATTTCTGGCAGCAGATGGATTTCCTCATCCCCGAATTGCTGC 39274 | ||||| ||| | | |||||||||||||||||||| || || |||||||| |||||| Sbjct 42772 ACACCGACGACGACGGGCATTTCTGGCAGCAGATGGGCTTTCTGGTCCCCGAACTGCTGC 42831 Query 39275 GGGTTCTGGCGCCGGGGCGTGTCGCCGCAATCCATGTGAAGGATCGCATCGTTCCCGGGG 39334 | ||||||| |||||| || |||| || ||||| || ||||| || ||| | || || | Sbjct 42832 GCGTTCTGGAGCCGGGCCGGATCGCGGCGATCCACGTCAAGGACCGGATCATCCCGGGCG 42891 Query 39335 GTAT-GACGGGTCTGGGGTTTCAAACCGTCTACCCGTTCTCCGACGATTGCATCGCCCG- 39392 | || |||||| | |||||||| ||| ||| || | | |||||| | || || Sbjct 42892 GCATCAACGGGT-TCGGGTTTCAGACCCTCTCGACGCTGCACATGGATTGCGT-GCGCGA 42949 Query 39393 TTTCAAGCGGCACGGGTTCGCTTTCCTCTCTCG----CAAGACGATCACCACGGATGTTG 39448 ||| |||| || || | || ||| ||||| ||||| ||||||||||| || | Sbjct 42950 GTTCCAGCGCCATGGCT----TTGCCTATCTCGGCATGAAGACCATCACCACGGACGTGG 43005 Query 39449 TCCGGGAAAATAATCAGACGTATCGCTTGGGATGGTCGGAACAATGCAAAGATGGCAGCC 39508 | || || || || ||||| |||||| |||| ||| | || |||||||| || ||| | Sbjct 43006 TGCGCGAGAACAACCAGACCTATCGCCTGGGCTGGACCGAGCAATGCAAGGACGGCTCGC 43065 Query 39509 GCATGGGTAACGGCCTGCCGGAATATCTGCTGATCTTCCGTAAGCCTCCGTCCGATAGTT 39568 ||||||| ||| |||||||||| |||||||||||||| || ||| ||||| | Sbjct 43066 GCATGGGCTGTGGCGTGCCGGAATACCTGCTGATCTTCCGCCGCCCGCCGACCGATCGCA 43125 Query 39569 CGAACGGATATGCCGATATTCCTGTCAAAAAGCAGAAGCGGGAATGGAA--GCAAGGTC- 39625 ||||| |||||||| || || ||| ||| ||||||| | | ||| | Sbjct 43126 GCAACGGCTATGCCGACCGGCCGGTGGCCAAGGCCAAGATGGAATGGGACCCCGAGGCCA 43185 Query 39626 ---ACTGGGACAATCCTGCTGGATACAGCCGCGCCCGTTGGCAGCTTGACGCCCACGGCT 39682 ||||| ||| | || |||||||||||||| |||||| | || || ||||||| Sbjct 43186 AGGACTGGCGCAACGAGGGCGGCTACAGCCGCGCCCGCTGGCAGGTCGATGCGCACGGCT 43245 Query 39683 TCATGC---CGAGCTCGGGCAATCG---TCTGCTCTCGACCGAAGAAATGGCGGGTTTGG 39736 ||||| ||| | ||| | || ||||| | | | || ||| ||| ||| Sbjct 43246 ACATGCGGTCGAAC---GGCGACCGGACCCTGCT---GCCGGGCGATCTGGAGGGACTGG 43299 Query 39737 AGCATCACCAGATCTTCAAACTGTGGAA-GCGCTACTCTCTCGAGACGGTCTATGATTTT 39795 | | ||| ||| ||| | ||||| |||| || || | ||||| ||||| Sbjct 43300 ACGCGGATCAGGTCTACAAGGTCTGGAAGGCGC-ACAACCTGTCTGCCGTCTACGATTTC 43358 Query 39796 GAGCACCACGTAAAAATCGCCGAGCATCTGGAAGAGCGGGGCATGCTGCCCTCCACCTTC 39855 ||||| ||||| |||||||| | || || | |||| | |||| |||||||| Sbjct 43359 GAGCATCACGTTCGGATCGCCGAAGACCTCGAGATGAAGGGCCGGTTGCCGCCCACCTTC 43418 Query 39856 ATGCTGCTGCCGCCCCACTCGACGGATGATGGTACCTGGACCGATATTACGCGCATGCTC 39915 |||||||||||||| ||| | || | | |||||||||| | ||||||||| Sbjct 43419 ATGCTGCTGCCGCCGCACAGCCTGCATCCCGATGTCTGGACCGATGTCGCGCGCATGCGG 43478 Query 39916 TCGATGAACACGCTGCAGGCTGCG-GCGGGTAAGGAAATGCACCTTTGCCCGCTTCAGTT 39974 | || || | ||||| ||| |||| ||||||||||||| |||||||| || | Sbjct 43479 ACCATCAATGCCGAACAGGC-GCGCAAGGGTCAGGAAATGCACCTGTGCCCGCTGCAATA 43537 Query 39975 CGACATCGTCGATCGAGCCATCGCCCAGTATTCCGAACCGGGTGAGACGGTGTTCGATCC 40034 ||||||||| || || ||||||| |||||| |||| ||||| || ||| | || || Sbjct 43538 CGACATCGTGGACCGCGCCATCGTCCAGTACACCGAGCCGGGCGAATGGGTCTATGACCC 43597 Query 40035 GTTCGGCGGCTTGATGACCGTGCCTTATCGGGCGATCAAGTTGGAGCGAAAGGCCGTCGC 40094 |||||||| ||||||||||||| | || ||| ||||| || ||| | | | ||| Sbjct 43598 CTTCGGCGGGCTGATGACCGTGCCCTTCCGCGCGGTCAAGCTGCGGCGCATAGGCATCGG 43657 Query 40095 GACGGAACTTAACGCCGGATACTTCCTCGATGGCTGCAAATACGTCGAGGCC 40146 | ||||| ||| || |||| ||||| ||||||||||||||||||||| Sbjct 43658 GGTCGAACTGAACAAGGGCTACTGGCTCGACGGCTGCAAATACGTCGAGGCC 43709 Score = 179 bits (198), Expect = 1e-40 Identities = 296/425 (70%), Gaps = 8/425 (2%) Strand=Plus/Minus Query 4619 GCCCAGGTCGTCCTACAATCTTTGGTCTGGCCTGCGGGCATCACGGATGCGCAGAAAGCT 4678 || ||||||| || || | |||||||||| || || ||| | || | | || Sbjct 23884 GCGCAGGTCGCGCTGCAGGCGCTGGTCTGGCCGGCAGGTGCCACCGCCGCCAACATCGCG 23825 Query 4679 GCTGCGCTCGCTTCACTTGAAACTACGAGCATCGTCGCTCGCAACGGAGTCTGACACCCA 4738 || | | | || | || |||| | ||||||| || || |||||||| ||| ||| Sbjct 23824 GCCGGGGTGGCCGCCCTGAAAACCCAGGGCATCGTTGCCCGGAACGGAGTGTGAT--CCA 23767 Query 4739 TGCCAACTGTACTTGACTATTTGCAGGCTCCGGAGTTCGCGGATGACCGGCTTACTGAAA 4798 || | || || | |||||| || ||| || || ||| |||||||||| || || || Sbjct 23766 TGGCGACCGTTATGGACTATCTGACGGCCCCCGAATTCTCGGATGACCGTCTGACCGAGG 23707 Query 4799 GCATCAATATCCCTCCCTATCGTACCGGTCGTCCGGCGCAGCTCGGAATATTTACCGATG 4858 ||||| || | ||||| |||||| || ||||| ||| | || || || |||| Sbjct 23706 CGATCAACGTCGCGGCCTATGATACCGGCCGCCCGGCCCAGTTGGGGATCTTCCGGGATG 23647 Query 4859 AGCCGATCGCCACGACGTACGTCCGTCTGGGGTACACTTCTGACGAGATCACTATCATTC 4918 | ||||| ||||||||| ||| || |||||| ||| ||||||||| | ||||| | Sbjct 23646 TGACGATCCCCACGACGTTCGTGCGCCTGGGGATCACCGAGGACGAGATCGCCATCATCC 23587 Query 4919 CCGCGCGTGAGCGTGGTGGCGAGAGCAATCTCAACATGCGCGGTGATCGTCAGGGCGTGA 4978 || |||| ||||| || |||||| || | ||||||||| ||||| |||||| Sbjct 23586 CCTCGCGCGAGCGGGGCGGCGAGTCGAACGTGAACATGCGCAAGGATCG---GGGCGTCC 23530 Query 4979 TGA---TTGAAATCCCGCATTTCCCGCTGGATGACAAGATTACACCGAGCGATCTGCAAA 5035 ||| | || |||||||| ||||||||||||||| ||| | || ||||||||| | Sbjct 23529 TGAACCTCGACATCCCGCACTTCCCGCTGGATGACGCGATCAGCCCTGCCGATCTGCAGA 23470 Query 5036 ACCTC 5040 || || Sbjct 23469 ACATC 23465 Score = 120 bits (132), Expect = 1e-22 Identities = 119/153 (78%), Gaps = 6/153 (4%) Strand=Plus/Minus Query 5596 CGCTACATCGCGCCGCCGGATACGATTTCCGAC---GCGAACCGCGCGCCCCGTCCTACC 5652 |||||||||||||||||||| | || |||| ||||||||||||||||| ||| Sbjct 22906 CGCTACATCGCGCCGCCGGACAGCAT---CGACCTGGCGAACCGCGCGCCCCGGCCTGAA 22850 Query 5653 GACAAAATCTTCATCTCCACCGAGGAGCTGAATCACGGCAAGGGCGAAGAAGTTCATTCG 5712 |||| |||||| | || ||| | || ||| |||||||||||| ||||| | || || Sbjct 22849 AACAAGATCTTCGTGTCGACCAATGACCTGCCGCACGGCAAGGGCAAAGAAATCCACACG 22790 Query 5713 GAATCGAACGTGATGCCGATCTGCACGCGTCCG 5745 || |||||| | |||||||||||||||| ||| Sbjct 22789 GAGTCGAACATCCTGCCGATCTGCACGCGGCCG 22757 >seq192533 Length=12417 Score = 239 bits (264), Expect = 2e-58 Identities = 564/845 (67%), Gaps = 44/845 (5%) Strand=Plus/Minus Query 41522 CTACCGCTGATCATTGATAGCTTCGCCGGAGGCGGCGGCGCCTCCACCGGAATCGAGATG 41581 || || || ||||| || ||||||||||| |||||||| ||| |||||| ||||||||| Sbjct 1140 CTTCCCCTCATCATCGACAGCTTCGCCGGTGGCGGCGGGGCCAGCACCGGGATCGAGATG 1081 Query 41582 GCGCTGGGTCGCTCGCCTGACCTTGCCATCAATCATAATCCGCAGGCTCTTGCGCTGCAT 41641 ||||| || || ||||| ||| | || ||||| || | | || | || || |||||||| Sbjct 1080 GCGCTCGGCCGATCGCCCGACGTGGCGATCAACCACAGTGCGAATGCGCTGGCGCTGCAC 1021 Query 41642 GGCGCCAATCACCCTGATACGCTGCACATCTCGGAA--AACATCTACAAGGTCGATCCGT 41699 | || || || || || ||||||||| || | | ||||||| | ||||| ||| Sbjct 1020 GCGGCGAACCATCCCGAGACGCTGCAC--CTGGACAGCAACATCTGGGACGTCGAGCCGC 963 Query 41700 TGGACTATGTCGCCGGCCAGCATATCGGCCTTGCCTGGTTCTCTCCCGATTGCAAACATT 41759 || | || ||| | |||| |||| || ||| | ||||| ||||| || | Sbjct 962 TGACCGTAACCGGCGGGCGGCATGTCGGGCTGCTGTGGGCCAGCCCCGACTGCAAGCACT 903 Query 41760 TCAGCAAGGCCAAGGGTGGCAAGCCGGTCGAGCGTAATATCCGAGACCTCGCTCATATCA 41819 || || |||||||| ||| |||| ||| ||||| ||||| ||||| || Sbjct 902 TCTCGAAAGCCAAGGGCGGCGCGCCGCGCGACCGTAACATCCGCGACCTGGC-------- 851 Query 41820 TTCCGTTCTGGGTTGAGCGTGTCCAGAAAAGCGGA----GGCAAGATCGACGTTATCATT 41875 ||||| ||| || | || || | |||| |||||| || Sbjct 850 -------ATGGGT----CGTCGTCAAATGGGCCGAGTTCGCCAAGCCCGACGTGATTTGC 802 Query 41876 ATGGAGAACGTTGAAGAATTTGCGACGTGGGGGCCGCTCGTCCAGACTGACCGGGGATTG 41935 |||||||| || || || || | ||| ||||| ||| ||| | | || ||| | Sbjct 801 ATGGAGAATGTCGAGGAGTTCGTGACCTGGGGTCCG---GTCGACAACGA-CGGCCA--- 749 Query 41936 ATGCCGGATC-CGGATCGGAAAGGCGAAACCTTTCAGCAATGGTGCAAGAAGCTTCGCCG 41994 ||| |||| ||| | | ||| ||||| ||| ||| ||| ||| Sbjct 748 --GCC-GATCAAGGAACTGGCCGGCACCACCTTCGAGCTTTGGGTGAAGCGGCTGAAAAA 692 Query 41995 CCTCGGCGGCAAGCTGGAGAAACGGGAATTGCGCGCATGCGATTACGGCGCACCGACGAT 42054 |||| |||| | || || || ||||||| ||||| |||||||| |||||||| Sbjct 691 AGCCGGCTACAAGGTCCAGTGGCGCGAGCTGCGCGCCTGCGACTACGGCGCGCCGACGAT 632 Query 42055 CCGCAAGCGCCTTTTCGTCATCATCCGTTTTGATGGTCAAAAGATCGTCTGGCCGGAACC 42114 |||||||||| ||| | || || || || | |||||||||||| | || Sbjct 631 CCGCAAGCGCTGGTTCCTGGTCGCGCGCCGCGACGGGCGGCCCATCGTCTGGCCGAAGCC 572 Query 42115 GACGCACGGCGCGCCCGATGATGCCGACGTGATCGCCGGTCGCAAGCT---ACCGTGGCG 42171 ||| || ||| || | ||||| || ||| | ||||||| |||||||| Sbjct 571 GACCCATGGCAACCCAGCCTCGGCCGAGGT--CCGCAAG-GGCAAGCTGCAGCCGTGGCG 515 Query 42172 CACTGCGGCAGAATGCATCGACTGGTCGATCCCATGCCCGTCGATCTTCGATAGCTCGGC 42231 ||| ||||| || |||||||||||||| | || ||||| |||||||| |||||||| Sbjct 514 CACAGCGGCCGAGTGCATCGACTGGTCTCTGCCCTGCCCCAGCATCTTCGACAGCTCGGC 455 Query 42232 CGATATCGCCGAGAAGCACGGTCTGAAGGCTATCAGGCCTCTGGCGGACAACACTATGGC 42291 ||||||| | |||||||| ||| || | | || ||||||| |||||| |||| Sbjct 454 CGATATCATGGCCAAGCACGGCCTGCGCGCAGTGCGCCCGCTGGCGGCCAACACGCTGGC 395 Query 42292 TCGTGTCGCGCGCGGCATGAAACGTTACGTTCTCGATGCCGACAGGCCTTTCATCGTCAA 42351 || || |||||||||||||| || || || |||| || | | ||| ||| | || || Sbjct 394 ACGGGTGGCGCGCGGCATGAAGCGATATGTGATCGAGGCGCAAAAGCCGTTCCTGGTGAA 335 Query 42352 CCTGA 42356 ||||| Sbjct 334 CCTGA 330 >seq158040 Length=458 Score = 185 bits (204), Expect = 3e-42 Identities = 243/334 (73%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 42024 TGCGCGCATGCGATTACGGCGCACCGACGATCCGCAAGCGCCTTTTCGTCATCATCCGTT 42083 ||||||| ||||| |||||||| |||||||||||||||||| || | || || Sbjct 18 TGCGCGCCTGCGACTACGGCGCGCCGACGATCCGCAAGCGCTGGTTTCTGGTCGCGCGCC 77 Query 42084 TTGATGGTCAAAAGATCGTCTGGCCGGAACCGACGCACGGCGCGCCCGATGATGCCGACG 42143 ||||| | |||| ||||||| | ||||| || ||| || | ||||| | Sbjct 78 GCGATGGGCGGCCCATCGCCTGGCCGAAGCCGACCCATGGCAACCCGGCCTCGGCCGAGG 137 Query 42144 TGATCGCCGGTCGCAAGCTAC---CGTGGCGCACTGCGGCAGAATGCATCGACTGGTCGA 42200 | ||| | ||||||| | |||||||||| ||||| || |||||||||||||| Sbjct 138 TC--CGCAAGG-GCAAGCTGCAGCCGTGGCGCACCGCGGCCGAGTGCATCGACTGGTCTC 194 Query 42201 TCCCATGCCCGTCGATCTTCGATAGCTCGGCCGATATCGCCGAGAAGCACGGTCTGAAGG 42260 | || ||||||||||||||||| ||||||||||||||| | |||||||| ||| | Sbjct 195 TGCCCTGCCCGTCGATCTTCGACAGCTCGGCCGATATCATGGCCAAGCACGGCCTGCGCG 254 Query 42261 CTATCAGGCCTCTGGCGGACAACACTATGGCTCGTGTCGCGCGCGGCATGAAACGTTACG 42320 | || | || ||||||| |||||| |||| ||||| |||||||||||||| || || | Sbjct 255 CCGTCCGTCCGCTGGCGGTCAACACGCTGGCACGTGTGGCGCGCGGCATGAAGCGCTATG 314 Query 42321 TTCTCGATGCCGACAGGCCTTTCATCGTCAACCT 42354 | |||| || | | ||||| | |||| ||| Sbjct 315 TGATCGAGGCGCAGAACCCTTTTCTGGTCAGCCT 348 >seq177236 Length=4807 Score = 156 bits (172), Expect = 1e-33 Identities = 251/358 (70%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 31448 CCGCCCTGACTGTCGAGCATGGTCAGCGTCGCATTG-AAGCCGTTCAACACCACTTCGGT 31506 ||||| | | |||||||||||||| | |||| | ||| || | |||| ||||| Sbjct 1406 CCGCCACGGCCGTCGAGCATGGTCAAC-TCGCTGCGGAAGGGACGCAGCGCCACCTCGGT 1348 Query 31507 TGTGTAGCGATCACCACCGTCGGAGTGCTGCCACTTGCGGGTTTGCAGCTTGCCCTCGAT 31566 | ||||| || || | || |||||| |||||||||| ||||| |||||||| Sbjct 1347 CGAATAGCGGTCGTTGCCTTGCTGGTCCTGCCATTTGCGGGTTTCCAGCTGGCCCTCGAC 1288 Query 31567 GTAAACCTTCGATCCCTTTTTCAGGTATTGCTCGCAAACCTTGACGAGACCTTCGGTGAA 31626 || ||||| ||||| ||||||||||||||| || ||| || || | | Sbjct 1287 ATAGACCTTGCTGCCCTTCTTCAGGTATTGCTCGGCCACGCGGACCAGGGGCTCCGAATA 1228 Query 31627 GACGACGACGCTATGCCACTCGGTGCGCTCCTTGCGGTCGCCGCTGTCGCGGTCGCGCCA 31686 || | ||||| | |||||||||||||| |||||||| |||||| ||| |||||| ||| Sbjct 1227 GATGGCGACGGTGTGCCACTCGGTGCGTTCCTTGCGTTCGCCGGTGTTGCGGTCCTTCCA 1168 Query 31687 GCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCTACCCCCGGCTTGTGTCTTTCGGAT 31746 | | ||||| || || | || ||| ||||||| | || ||| || | ||||| Sbjct 1167 GGTCTCGGAGGTTGCGATCCGCAGGTTGGCGATCTTGCCGCCGTTCTGGAAGCTGCGGAT 1108 Query 31747 TTCCGGATCGGCGCCGAGATGGCCGATAAGAATGACTTTGTTGACGCTACCGGCCATC 31804 || || || || |||| |||||| || || || ||||| ||||| || |||||| Sbjct 1107 CTCGGGGTCTTGACCCAGATTGCCGATCAGGATCACCTTGTTCACGCTGCCTGCCATC 1050 >seq179236 Length=9799 Score = 113 bits (124), Expect = 2e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 41522 CTACCGCTGATCATTGATAGCTTCGCCGGAGGCGGCGGCGCCTCCACCGGAATCGAGATG 41581 || || || ||||| || ||||||||||| |||||||| ||| |||||| |||||| || Sbjct 165 CTGCCCCTCATCATCGACAGCTTCGCCGGTGGCGGCGGGGCCAGCACCGGTATCGAGGTG 106 Query 41582 GCGCTGGGTCGCTCGCCTGACCTTGCCATCAATCATAATCCGCAGGCTCTTGCGCTGCAT 41641 || ||||| |||||||| ||| | || ||||| |||| | | || || |||||||| Sbjct 105 GCCCTGGGCCGCTCGCCCGACGTGGCGATCAACCATAGCGCCAATGCGCTGGCGCTGCAC 46 Query 41642 GGCGCCAATCACCCTGATACGCTGCAC 41668 | || || || || || ||||||||| Sbjct 45 GCGGCGAACCATCCCGAGACGCTGCAC 19 >seq190645 Length=29596 Score = 109 bits (120), Expect = 2e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 43339 CGCCCGCGCCCGAGAAGTCGCGGCGTTCATGCGGGCGCACGGGTTCTGGGATGAGCGCGA 43398 |||||||||||| | || || | |||| | || |||||| |||||| | |||| Sbjct 232 CGCCCGCGCCCGCCAGGTGGCCGAGTTCCTTCGCGCGCACAACGCCTGGGACGGCGGCGA 291 Query 43399 ATTCGTAACCCTCGATATCGACGGTCACACCTTCGTCATCGTCGATATCGGCATGCGGAT 43458 ||||| || || ||| |||| || ||| ||| | |||| |||||||||||||| Sbjct 292 GTTCGTCACGCTAGATGTCGATGGCGCGGCCTATGTCGTGATCGACATCGGCATGCGGAT 351 Query 43459 GCTCACCCCGCGCGAACTGTTCAATGCGCAGGGCTTTCCGGGTGATTATCAGATTGATGG 43518 ||| ||||||||||| |||||| || |||||||| |||| ||| ||| || || || Sbjct 352 GCTGACCCCGCGCGAGCTGTTCCGCGCCCAGGGCTTCCCGGATGACTATGTCATCGAGGG 411 Query 43519 TGTCTTGG 43526 |||| || Sbjct 412 CGTCTGGG 419 >seq199262 Length=27203 Score = 107 bits (118), Expect = 6e-19 Identities = 210/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 43220 TATTACGGCACGGGTGACGGCG-GCGAAGAAAATCAGCCAGCGCGCACCATTACCACGAA 43278 || ||||||||||| ||||||| ||| | | |||| || ||| | || || Sbjct 517 TACTACGGCACGGGCGACGGCGCGCGCACGGACG-AGCCGATGCACACGGTGACAGTCAA 575 Query 43279 AGACCGGCATGGCCATGTCGAGGCGGCGCTTGATGTTCCGCCATTTACCGAAGTGCAGGC 43338 |||||| ||||| | |||| || || | | ||||| ||| | | ||| Sbjct 576 GGACCGGATGGGCCACATGCAGGCCGCACTGGCCGCACCGCCCTTTGCGCCCGAGCATCA 635 Query 43339 CGCCCGCGCCCGAGAAGTCGCGGCGTTCATGCGGGCGCACGGGTTCTGGGATGAGCGCGA 43398 |||||||||||| | || || | |||| |||| |||||| |||||| | |||| Sbjct 636 CGCCCGCGCCCGCCAGGTGGCCGAGTTCCTGCGCGCGCACAACGCCTGGGACGGCGGCGA 695 Query 43399 ATTCGTAACCCTCGATATCGACGGTCACACCTTCGTCATCGTCGATATCGGCATGCGGAT 43458 ||||| || || || ||||||| ||| ||| | |||| |||||||||||||| Sbjct 696 GTTCGTGACGCTGGAGGTCGACGGCGCGGCCTATGTCGTGATCGACATCGGCATGCGGAT 755 Query 43459 GCTCACCCCGCGCGAACTGTTCAATGCGCAGGGCTTTCCGGGTGATTATCAGATTGATGG 43518 ||| |||||||||||| ||||| || |||||||| || | || ||| || || || Sbjct 756 GCTGACCCCGCGCGAATTGTTCCGCGCCCAGGGCTTCCCCGACGACTATGTCATCGAGGG 815 Query 43519 TGTCTTGG 43526 |||| || Sbjct 816 CGTCTGGG 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169352147311776