Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq196771 163 3e-35 >seq196771 Length=22834 Score = 163 bits (180), Expect = 3e-35 Identities = 194/263 (74%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 |||| |||||| ||||||| ||||| || |||| |||||| | ||||| |||| || Sbjct 20228 TCCAGGTGGTTCAGGTAGATATGCGCATCGCCCATGGTGTGGATGAAGTCGCCCGCCTCG 20169 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 || ||||| ||||||| ||| | || ||||||| ||| ||| |||||||| || Sbjct 20168 TATCCCGTCACATGGGCCAGCATATGCGTCAGCAGCGCATAGGAGGCGATGTTGAACGGC 20109 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 ||||||||| |||||| |||| | |||||| ||||| ||| ||| ||||| | Sbjct 20108 ACCCCCAGGAACATGTCGGCCGAGCGCTGGTAAAGCTGCAGCGACAGCCGGCCGTCCTGC 20049 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 || | ||| ||||| | ||||| |||||||| |||||| | || || ||||| Sbjct 20048 ACCCGCACCTGCCACAGCGTATGGCAGGGCGGCAGGGCCATGCGGTCCACCTCTCCGGGG 19989 Query 147166 TTCCAGGCCGAGACCACCAGCCG 147188 |||||||||||||| | |||||| Sbjct 19988 TTCCAGGCCGAGACGATCAGCCG 19966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581850718084800