Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_026608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq178390 96.9 9e-16 >seq178390 Length=32315 Score = 96.9 bits (106), Expect = 9e-16 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 38194 TGCGCGTAGTGTTCTACCCGTTCGTGCTTATGGACGTGCCCACAGGCAACACGCTACCGA 38253 ||||||| ||||| || ||| | || ||||||||||| | ||||||| || |||| Sbjct 19819 TGCGCGTGACATTCTATCCCTTCATCCTGATGGACGTGCCGCCCGGCAACAGTCTGCCGA 19878 Query 38254 ACCCATACAGCGACAACGCCGCCGACGTAGGGCAACCGGCCTTCCCGTGGCGCGGTCGTA 38313 |||| || |||||||||||||| || || || || || || ||||| || || | Sbjct 19879 ACCCCTATTCGGACAACGCCGCCGAGACCGGCCAGCCCGCGTTTCCCTGGCGGGGGCGGA 19938 Query 38314 TCACATGCAGCCCCGCACCGGGCTACGTCGGCACCGCCGATAAGACCG 38361 |||| || || ||| |||||| || ||| |||| || ||||||| Sbjct 19939 TCACCTGTTCGCCTGCAGCGGGCTTCGCCGGGACCGTGGACAAGACCG 19986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134217257560620