Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq179470 91.5 3e-13 >seq179470 Length=35510 Score = 91.5 bits (100), Expect = 3e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 210921 TGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAAGAC 210980 |||||| | ||||| |||| |||| ||||| || || | ||| || ||||||||||||| Sbjct 22867 TGGCGGAGGAGGTGGGATTCGAACCCACGGTGGGGTTGCCCCCACGTCGGTTTTCAAGAC 22926 Query 210981 CGTTGCATTAAACCGCTCTGCCACT 211005 || ||||||||||| |||||||||| Sbjct 22927 CGGTGCATTAAACCACTCTGCCACT 22951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1110626828153136