Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_028768.1 Length=49714 Score E Sequences producing significant alignments: (Bits) Value seq178269 91.5 5e-14 >seq178269 Length=5053 Score = 91.5 bits (100), Expect = 5e-14 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 36080 CTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACC 36139 |||||||||| ||||||||||||| ||||| |||||||| |||||| ||||||||| Sbjct 3459 CTGGTCGGAGCGAGAGGATTCGAACCTCCGACCCCCTGCTCCCGAAGCAGGTGCGCTACC 3518 Query 36140 TGACTGCGCTACACTCCGAAGGTGCCGGGC 36169 | ||||||||| |||||| ||| |||| Sbjct 3519 AGGCTGCGCTACGCTCCGACCGTGGGGGGC 3548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158539448022384