Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq179470 95.1 5e-15 >seq179470 Length=35510 Score = 95.1 bits (104), Expect = 5e-15 Identities = 127/176 (72%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 32691 CTGATCGTG---GACGAGTCCTCCATGGTGGACGAGCAGGTGGGAGAAGACCTGCTGTCC 32747 ||||||||| |||||| || ||||| | |||| | ||| |||||| || | Sbjct 8219 CTGATCGTGCTCGACGAGGTGTCGATGGTCGGCGAGGAAATGGCCCGCGACCTGATGAGC 8160 Query 32748 TTCGGGGTGCCGATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCCGTCATGGGGGCC 32807 ||||| ||||||||||| |||||||| |||| |||||||||||| ||| ||| | Sbjct 8159 TTCGGCAAGCCGATCCTCGTGCTGGGCGATCCCGGCCAGCTGCCGCCGATCAAGGGCGAA 8100 Query 32808 GGGTTCTTCACCAAGCAGAAGGCCGACTTCCTCCTGACCGACATCCACCGACAGGC 32863 || ||||||| | | ||||| || | |||||||| |||||||| ||||| Sbjct 8099 GGCGCCTTCACCCGCGATGCGCCCGACGTCATGCTGACCGAGATCCACCGTCAGGC 8044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190977545890560