Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq192063 84.2 2e-11 >seq192063 Length=13941 Score = 84.2 bits (92), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 49956 CCCTACAGGATTCGAACCTGTGACCCCCTGATTAAGAGTCAGGTGCTACCACCAACTGAG 50015 ||| |||||||||||||||||||||| |||||||| |||||| |||| | |||||||||| Sbjct 2911 CCCGACAGGATTCGAACCTGTGACCCACTGATTAAAAGTCAGTTGCT-CTACCAACTGAG 2969 Query 50016 CTAAGG 50021 ||| || Sbjct 2970 CTACGG 2975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470831916215280