Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq223622 129 5e-25 seq220036 122 7e-23 seq190944 122 7e-23 seq176952 105 6e-18 seq66624 100 2e-16 seq58823 100 2e-16 seq215275 98.7 9e-16 seq207513 98.7 9e-16 seq209501 96.9 3e-15 seq177117 96.9 3e-15 seq24650 96.9 3e-15 seq209500 93.3 4e-14 seq198453 93.3 4e-14 seq203637 91.5 1e-13 seq223142 89.7 4e-13 seq209919 89.7 4e-13 seq96961 86.0 5e-12 seq74814 86.0 5e-12 seq119310 84.2 2e-11 seq211431 82.4 7e-11 seq37846 82.4 7e-11 >seq223622 Length=3914 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2397 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 2456 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 2457 TTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 2516 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || ||||| Sbjct 2517 TGCTTTACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCCGTG 2576 Query 39262 AGCGTTTTAACAAAGATTTGCATC 39285 || || || |||||||| |||||| Sbjct 2577 AGGGTCTTGACAAAGATCTGCATC 2600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 1881 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 1940 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 1941 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2000 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||| || | || || || || || || || Sbjct 2001 CTCGATGGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTGAGGGTCTTGAC 2060 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 2061 GAAGATCTGCAT 2072 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1642 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 1701 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 1702 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1761 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | || || | || || Sbjct 1762 TGCTTCACGTTCTCGATGGTGTCAGAGCT---CTCGACCTCGAGGGTAATGGTCTTGCCG 1818 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 1819 GTCAGCGTCTTGACGAAGATCTGCAT 1844 >seq220036 Length=2680 Score = 122 bits (134), Expect = 7e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 115 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 174 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| |||| | Sbjct 175 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 234 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 235 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 294 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 295 GAAGATTTGCATGTT 309 >seq190944 Length=484 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 418 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 359 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 358 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 299 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||| ||||| || || | ||||| | || || |||||||| || || Sbjct 298 CTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGCGTCTTGAC 239 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 238 AAAGATCTGCAT 227 >seq176952 Length=5663 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1120 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 1061 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || || ||||||||||| | ||| | || ||| |||||| || ||| Sbjct 1060 TTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTC 1001 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||| ||||| || || | ||||| | || || ||| Sbjct 1000 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 941 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 940 AGGGTCTTCACGAAGATCTGCAT 918 >seq66624 Length=223 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 39112 TCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCG 39171 ||||| || || || |||| || ||||| ||||| || || ||||| |||||||||||| Sbjct 222 TCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCG 163 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 | || | || ||| |||||| || ||||| || | || | | |||||||| ||| Sbjct 162 GGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGAC 103 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | || ||| | || || ||||| || || || ||||| ||||| Sbjct 102 TCGACCTCGAGGGTAATAGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 50 >seq58823 Length=322 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 165 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCCTCGAGCTGC 106 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || || |||||| ||| ||| Sbjct 105 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 46 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || |||| || | | |||||||||||||| || || Sbjct 45 TGCTTGACGTTCTCGATGGTATCGCTCGACTCGACCTC 8 >seq215275 Length=6875 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 4213 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4154 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| ||||| |||| | Sbjct 4153 GATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 4094 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||| ||||| || || | || || | || || || || || || || Sbjct 4093 CTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGAGTCTTGAC 4034 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 4033 GAAGATCTGCAT 4022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 39109 TAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGG 39168 || ||||| || || || |||| || ||||| ||||| || || || || ||||||||| Sbjct 3927 TAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 3868 Query 39169 TCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTC 39228 || | ||| | || ||| |||||| ||| ||||| || | | | | || ||||| Sbjct 3867 TCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATGGTGTCGCTG 3808 Query 39229 GACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || | ||||| | || || ||||| || || || ||||| ||||| Sbjct 3807 GACTCGACCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3752 >seq207513 Length=1179 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| ||||| Sbjct 996 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAA 937 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| || || || | | Sbjct 936 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 877 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || ||||| || || || Sbjct 876 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 817 Query 39273 AAAGATTTGCAT 39284 ||||||||||| Sbjct 816 GAAGATTTGCAT 805 >seq209501 Length=1560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| |||||||| || Sbjct 1005 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 946 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| ||||| || | | Sbjct 945 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 886 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||| ||||| || || | |||| || | |||| || || || || Sbjct 885 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGA---TTGTCTCCGTGAGGGTCTTCAC 829 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 828 GAAGATCTGCAT 817 >seq177117 Length=2010 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1447 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 1388 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| |||| ||| | || ||| |||||| || || Sbjct 1387 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGAATCTTT 1328 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | ||||| | || || || Sbjct 1327 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 1268 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||||||||| Sbjct 1267 AGGGTCTTGACGAAGATTTGCAT 1245 >seq24650 Length=175 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 165 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGC 106 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 105 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 46 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || |||| || | | |||||||||||||| || || Sbjct 45 TGCTTGACGTTCTCGATGGTATCGCTCGACTCGACCTC 8 >seq209500 Length=1097 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| | || || || || ||||| || || || | Sbjct 1055 GCGGAGCACGAGGTGGAGGGTGGACTCCGTCTGGATGTTGTAGTCGGCCAGAGTGCGGCC 996 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGA-----CGCTGCTGGTCGGTGGGCACGCTC 39183 ||| || ||||| |||||||| || | ||| ||||||||||| | || | || | Sbjct 995 GTCCTCGAGCTGCTTGCCCGCGAAGAAGAGATGAGGCGCTGCTGGTCAGGAGGGATGCCC 936 Query 39184 TCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACC 39243 || |||||| ||| ||||| || | || | | ||| ||||| ||||| || || | Sbjct 935 TCCTTGTCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGG 876 Query 39244 GTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| | || || ||||| || || || ||||| ||||| Sbjct 875 GTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 835 >seq198453 Length=848 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/203 (68%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 803 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 744 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | || | || ||| |||||| ||| ||| Sbjct 743 TTGCCGGCGAAGATGAGGCGCTGCTGRTCRGGRGGGATGCCCTCCTTGTCCTGGATCTTC 684 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || || ||||| || || | ||||| | || || || Sbjct 683 TGCTTSACGTTCTCGATSGTGTCRSWKGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 624 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 623 AGGGTCTTCACGAAGATCTGCAT 601 >seq203637 Length=1734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| || || || || || Sbjct 1733 TTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATG 1674 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | || | Sbjct 1673 AGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCG 1614 Query 39217 ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAG 39276 | || ||| |||||| || || | ||| || | || || || || || || || ||| Sbjct 1613 ATGGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAG 1554 Query 39277 ATTTGCAT 39284 || ||||| Sbjct 1553 ATCTGCAT 1546 >seq223142 Length=9055 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || ||||| |||| || ||||| Sbjct 4883 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGACCGTCCTCGAGCTGC 4942 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| || ||| Sbjct 4943 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 5002 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 5003 TGCTTCACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTGCCG 5059 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || ||||| ||||| Sbjct 5060 GTGAGCGTCTTGACGAAGATCTGCAT 5085 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 6363 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 6422 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | || ||| |||||| ||| ||||| || | | Sbjct 6423 GATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 6482 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||| || ||| || || || | ||||| | || || |||||||| || Sbjct 6483 CTCGATCGTGTCCGAGCT---TTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTT 6539 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 6540 GACGAAGATCTGCAT 6554 >seq209919 Length=3227 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2328 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 2269 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 2268 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2209 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || ||||| || || | ||||| | || || || || || || || Sbjct 2208 CTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 2149 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 2148 GAAGATCTGCAT 2137 >seq96961 Length=190 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 132 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 73 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| || | | ||| |||||| ||| ||| Sbjct 72 TTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 13 Query 39202 TGTTTGA 39208 || |||| Sbjct 12 TGCTTGA 6 >seq74814 Length=136 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| ||||| || || || Sbjct 2 TTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATG 61 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 ||||||||||| || | ||| | || ||| |||||| ||| ||||| |||| || | Sbjct 62 AGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCG 121 Query 39217 ACCGTATCGCTCGAC 39231 | ||| ||||||||| Sbjct 122 ATCGTGTCGCTCGAC 136 >seq119310 Length=139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 39144 GCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG 39203 ||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||||| Sbjct 139 GCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTG 80 Query 39204 TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAG 39263 || | || | | || ||||||||||| || || | ||||| | || || ||||| Sbjct 79 CTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAG 20 Query 39264 CGTTTTAACAAAGATTTGC 39282 || || || ||||||||| Sbjct 19 GGTCTTCACGAAGATTTGC 1 >seq211431 Length=3216 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || ||||| || || ||||| || || || |||| || ||||| Sbjct 462 TGGAGGGTGGACTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 403 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 402 TTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 343 Query 39202 TGTTT 39206 || || Sbjct 342 TGCTT 338 >seq37846 Length=175 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| ||||| || || || Sbjct 174 TTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 115 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTT 39206 |||||||||||||||| ||| | || ||| |||||| ||| ||||| || Sbjct 114 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTT 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428370417200066