Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_030943.1 Length=54990 Score E Sequences producing significant alignments: (Bits) Value seq178390 104 8e-18 >seq178390 Length=32315 Score = 104 bits (114), Expect = 8e-18 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 3603 TGCGGATCAACTCTCCCGGCGGCGACGTCTACGACGCGATCGCCATCACCAACGCGCTGC 3662 ||||| ||||| |||||||| |||| ||||||| | || ||| |||||||||| Sbjct 4674 TGCGGCTCAACAGCCCCGGCGGATCGGTCTTCGACGCGGTGGCGATCCACAACGCGCTGA 4733 Query 3663 GCAACCACGACGCGACGATCACCGTCCAGGTCGACGGCCTCGCCGCGTCGGCGGCGAGCT 3722 |||||| | ||| |||||||| | |||||||| ||||||| || || || || Sbjct 4734 AGCGCCACGAGGGCACGGTCACCGTCTGGATCGACGGCATCGCCGCCTCCGCCGCATCCT 4793 Query 3723 TCATCGCGATGGCCGGCGACGAGGTGGTGATGTGCCGCAACACCGAGATGATGATCCACG 3782 | |||| ||||| ||||||||| | || ||| | ||| || |||||||||||| Sbjct 4794 ACGTCGCCATGGCGGGCGACGAGATCGTCATGCCCGAGAACGCCTTCCTGATGATCCACG 4853 Query 3783 AC 3784 || Sbjct 4854 AC 4855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175377642075168