Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq196771 138 2e-27 >seq196771 Length=22834 Score = 138 bits (152), Expect = 2e-27 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 201846 CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTAC 201905 ||||||| ||||| |||||||| |||| |||||| ||| |||| | | Sbjct 19622 CCGACCGCACCGGGACGGGCACGATCTCGCATTTCGGGATGCAGTGCCGCTATCCTCTGG 19681 Query 201906 AAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGC 201965 | | || |||||||||||||| || |||||| | ||||| || ||| |||| || | Sbjct 19682 ATCAGGGCTTTCCGCTGGTCACGACGAAAAAGCTGCACCTGAAATCCATCGTCCACGAAC 19741 Query 201966 TGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCA 202025 ||||||||||||| ||| ||||| ||||||| ||| || | | ||| ||||| || Sbjct 19742 TGCTGTGGTTCCTGTCGGGCGACACGAACATCCGCTATCTGCAGCAGAACGGCGTCAGCA 19801 Query 202026 TCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGC 202085 ||||||||||||||||||| ||||| ||| | ||||| || || || | || |||| Sbjct 19802 TCTGGGACGAATGGGCGGACGCGAACGGCGACCTCGGCCCTGTCTATGGCCATCAGTGGC 19861 Query 202086 G 202086 | Sbjct 19862 G 19862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785792043320720