Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq196771 161 2e-34 >seq196771 Length=22834 Score = 161 bits (178), Expect = 2e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| ||||| |||||||| ||||| ||||||| ||| || | | ||| Sbjct 19624 GACCGCACCGGGACGGGCACGATCTCGCATTTCGGGATGCAGTGCCGCTATCCTCTGGAT 19683 Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190 | || || ||||||||||| || |||||| |||||||| ||| ||| ||||||||||| Sbjct 19684 CAGGGCTTTCCGCTGGTCACGACGAAAAAGCTGCACCTGAAATCCATCGTCCACGAACTG 19743 Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250 ||||||||||| |||||||| ||||||| |||||| | | ||| |||||| ||| Sbjct 19744 CTGTGGTTCCTGTCGGGCGACACGAACATCCGCTATCTGCAGCAGAACGGCGTCAGCATC 19803 Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309 ||||| || ||||| || | | ||||| || ||||| ||||| || | |||||||| Sbjct 19804 TGGGACGAATGGGCGGACGCGAACGGCGACCTCGGCCCTGTCTATGGCCATCAGTGGCG 19862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768145698739120