Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq196771 114 5e-21 >seq196771 Length=22834 Score = 114 bits (126), Expect = 5e-21 Identities = 132/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGC 51867 ||||||| ||||| |||| || || ||| |||| | ||| | ||| || ||| Sbjct 19685 AGGGCTTTCCGCTGGTCACGACGAAAAAGCTGCACCTGAAATCCATCGTCCACGAACTGC 19744 Query 51868 TGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTT 51927 ||||||| || |||||| |||||| || | |||| || || ||||||||||||| | Sbjct 19745 TGTGGTTCCTGTCGGGCGACACGAACATCCGCTATCTGCAGCAGAACGGCGTCAGCATCT 19804 Query 51928 GGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCG 51985 |||||||||||||||| | || || |||| || ||||| ||||| | |||||||| Sbjct 19805 GGGACGAATGGGCGGACGCGAACGGCGACCTCGGCCCTGTCTATGGCCATCAGTGGCG 19862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189589256578020