Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq192063 82.4 9e-11 >seq192063 Length=13941 Score = 82.4 bits (90), Expect = 9e-11 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 165780 GGGTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 165839 ||| | ||||||||||||| ||||||||||| ||| ||| |||| |||||||||||||| Sbjct 2979 GGGCCCGTAGCTCAGTTGG-TAGAGCAACTGACTTTTAATCAGTGGGTCACAGGTTCGAA 2921 Query 165840 TCCTGTC 165846 ||||||| Sbjct 2920 TCCTGTC 2914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620324854905840