Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq197527 120 2e-22 >seq197527 Length=40067 Score = 120 bits (132), Expect = 2e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 7331 GAGGCCCAGTTCCTGGAGACGCGCCAGTTCCAGCGGTCTGAGGTGGCCATGTGGTTCCGC 7390 || ||||||| | |||| ||| ||||| || | || | ||||||| ||| | Sbjct 27361 GACGCCCAGTGGATCGAGAGCCGCAAGTTCACCCGTGCCGACATCGCCATGTTCTTCGGG 27302 Query 7391 ATCCCGCCCCACATGATCGGCGACACCACCAAGTCCACCAGCTGGGGGACCGGCATCGAG 7450 |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct 27301 GTCCCGCCCCACATGATCGGCGACACCGAGAAGTCCACGAGCTGGGGCACCGGCATCGAG 27242 Query 7451 CAGCAGTCCATCGGGTTCGTC 7471 |||||||| ||||| || ||| Sbjct 27241 CAGCAGTCGATCGGCTTTGTC 27221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248256537999186