Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4651 468 5e-127 seq15283 167 2e-36 seq4792 165 8e-36 seq3858 165 8e-36 seq1932 159 4e-34 seq7266 156 4e-33 seq4204 156 4e-33 seq1785 154 2e-32 seq6454 152 5e-32 seq6806 149 6e-31 seq140 145 8e-30 seq7588 141 1e-28 seq4764 140 3e-28 seq6713 132 5e-26 seq6105 116 4e-21 seq3544 109 6e-19 seq8684 105 7e-18 seq1372 93.3 4e-14 seq351 93.3 4e-14 seq85 93.3 4e-14 seq9032 89.7 5e-13 seq5976 89.7 5e-13 seq7225 86.0 6e-12 seq11192 84.2 2e-11 seq2256 84.2 2e-11 >seq4651 Length=3183 Score = 468 bits (518), Expect = 5e-127 Identities = 632/871 (73%), Gaps = 17/871 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||||||||| ||||||||| ||| |||||| | |||||||| | ||| | | Sbjct 981 GAGCCGCTGCTCGAGGAGAACCCCAACCGATTCGTGCTGTTCCCCATCCGCCACCAGCGC 1040 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||| ||||||||||| || |||||||| | |||||| || || ||| Sbjct 1041 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTG 1100 Query 116696 TCCAAGGACACGAGCGACTGGG-AGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | |||| || |||||| | ||| | ||| || ||||| | || ||||||||||| Sbjct 1101 AGCTCCGACATGAAGCACTGGGAATCGC-TCAACAACGACGAGAGGCACTTCATCAAGCA 1159 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 ||| ||||||| ||||| || |||||||||||||| ||||||||| | || || || Sbjct 1160 CGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCTT 1219 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | |||||||||||||| |||||||||| ||||||||||||||||| |||||||| || Sbjct 1220 CATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCATCGA 1279 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | ||||| || ||||| ||| |||||||||||| ||||| || | || Sbjct 1280 GAACATCCACTCCGAGATGTACTCGCTCCTCATCGACACCTACGTCAAGGACTCCGTCGA 1339 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| ||| | || |||||||||||| |||| | ||||| |||||||||| || Sbjct 1340 GAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTG 1399 Query 116995 GGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG------CCTTCGGCGAGCGCCTGGTGGC 117048 |||| || ||||| | || |||| || |||||| |||||| || || | Sbjct 1400 GGCGATGAAGTGGAT---CAACAAGGAGGGCGTCGAGACCTTCGCCGAGCGTCTCGTCGG 1456 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| |||||||||||| ||||||| || ||||| ||| | |||| || |||||||| Sbjct 1457 ATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTGGCTCAA 1516 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||||||||||||||| | ||||| |||||| | ||| | | || ||||| Sbjct 1517 GAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGATGAGGG 1576 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT-TTGGTGCAGC--GACCGAGCGC 117225 || || |||||||| ||||| | || | | | ||| | || || | | || | | Sbjct 1577 CCTCCACTGCGACTTCGCCTGCCTCCTCTAC-ACCATGCTCGT-CAACAAGCCCTCGACC 1634 Query 117226 GGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 | || || || | ||||| || ||| || |||| || ||| || ||| | ||||| Sbjct 1635 GACGTGC-CCAAGCAGATCATCCTCGAGGCTGTCGAGATTGAGAAGGAATTCGTGACCGA 1693 Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345 |||| || ||| || | || | || ||| |||| || ||||||||||| Sbjct 1694 GTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTACATCGAGTT 1753 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 |||||||||| | || || || || | | ||| ||||||||||||| | ||||||| Sbjct 1754 CGTCGCCGACCGCCTCCTCGCCGCCCTCGGCTGCGACAAGCACTACAACCAGACCAACCC 1813 Query 117406 GCTGGACTTTATGAACCTCATCTCCTTGGAG 117436 | | | ||| | ||||||||| | ||| Sbjct 1814 GTTCCCGTGGATGGAGCTCATCTCCCTCGAG 1844 >seq15283 Length=765 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| ||| | Sbjct 1 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 60 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| |||||||||||| ||||||| Sbjct 61 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 119 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| ||| |||||||| Sbjct 120 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCTGACTACAA 179 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || || || || | || || | |||||| Sbjct 180 CATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTGCGCGGCGGC 228 >seq4792 Length=3108 Score = 165 bits (182), Expect = 8e-36 Identities = 178/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| | Sbjct 1507 AACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTC 1566 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | |||| | ||| | || || | ||||| |||||||||||| ||| Sbjct 1567 CAGCGACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGG 1625 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| |||||| || ||||| || |||| ||||| || |||| Sbjct 1626 ACCAGCAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGCACTCTGGCTGACT 1685 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||||| |||| || || || || | ||| | | |||||| Sbjct 1686 ACAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGTGGCGGC 1738 >seq3858 Length=3670 Score = 165 bits (182), Expect = 8e-36 Identities = 164/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| ||||||||| |||| ||||| ||| | Sbjct 710 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 769 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| |||| || | ||||| |||||||||||| |||| || Sbjct 770 GATACCATCGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 828 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| |||||| || ||||| || |||| || ||||| ||||||||| Sbjct 829 GCAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAA 888 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || || || || Sbjct 889 CATCCAGAAGGAGTCCACCCTCCACCTCGT 918 Score = 156 bits (172), Expect = 4e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || || || ||||| ||||||||| |||| || || | Sbjct 479 AACATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCG 538 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | |||| ||||| | || || | ||||| |||||||||||| | || Sbjct 539 AGCGACACGATCGAGAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 597 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| ||| ||||| ||||| || |||| |||||||| |||||| Sbjct 598 CCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTA 657 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | || || || || || Sbjct 658 CAACATCCAGAAGGAGTCGACTCTCCACCTCGT 690 >seq1932 Length=5666 Score = 159 bits (176), Expect = 4e-34 Identities = 178/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 40683 CCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 40742 || || |||||| || ||||| || || ||||| ||||| ||||||||| | || ||||| Sbjct 5391 CCAAACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTCGA 5450 Query 40743 AGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCG 40801 ||| ||||| | | | |||| | ||| |||| |||| ||||| || |||||||| Sbjct 5451 GTCCAGCGACACCATCGAGAACG-TGAAGCAAAAGATTCAGGACAAGGAAGGCATCCCTC 5509 Query 40802 CGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 40861 | |||||||| || ||||||| |||||| || ||||| || |||| || |||| || Sbjct 5510 CCGACCAGCAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGTGCCCTGGCCG 5569 Query 40862 ACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||||||| |||| || || || || | || || | ||||| Sbjct 5570 ACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTTCTTCGTCTGCGTGGCGG 5624 >seq7266 Length=2119 Score = 156 bits (172), Expect = 4e-33 Identities = 176/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||||||||| ||||| || || || || ||||| ||||||||| |||| ||||| | Sbjct 1368 AACAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTC 1427 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | ||| | | | | |||| | ||| |||| || | ||||| ||||||||||| | | Sbjct 1428 GAGCGATACCATCGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCTCCCG 1486 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || ||||||| ||| || || ||||| || |||| |||||||| ||||| Sbjct 1487 ATCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACT 1546 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||||| |||| || || || || | || || | |||||| Sbjct 1547 ACAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTGCGCGGCGGC 1599 >seq4204 Length=3449 Score = 156 bits (172), Expect = 4e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || || || |||| ||||| | | | Sbjct 11 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATTACTCTCGAGGTCGAGTCGAGC 70 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| |||||||||||| ||||||| Sbjct 71 GACACTATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 129 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 130 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAA 189 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 190 CATCCAGAAGGAGTCCACGCTCCACCTCGT 219 >seq1785 Length=5934 Score = 154 bits (170), Expect = 2e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||||||||| ||||| || || || || ||||| ||||||||| |||| ||||| | Sbjct 4580 AACAATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTC 4521 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | |||| | ||| |||| || | ||||| || |||||||| | | Sbjct 4520 CAGCGACACGATCGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCG 4462 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| || || || ||||| || |||| ||||| ||| ||||| Sbjct 4461 ACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACT 4402 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||| |||| || || || || | || || | ||||| Sbjct 4401 ACAACATCCAGAAGGAGTCCACCCTTCACCTCGTTCTTCGTCTGCGTGGCGG 4350 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| ||||| | || Sbjct 4348 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 4289 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| ||||| || ||| |||| || Sbjct 4288 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCA 4230 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 4229 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAA 4170 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 4169 CATCCAGAAGGAGTCCACGCTCCACCTCGT 4140 >seq6454 Length=2394 Score = 152 bits (168), Expect = 5e-32 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || || || ||||| ||||||||| |||| || || | Sbjct 297 AACATGCAAATCTTCGTGAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTTGAGTCG 238 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | |||| ||||| | || || | ||||| |||||||||||| | || Sbjct 237 AGCGACACGATCGAGAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 179 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || ||||||| ||||||||| ||||| || |||| || |||||| |||||| Sbjct 178 TCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTA 119 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| | || || || || || Sbjct 118 CAACATCCAGAAGGAATCGACTCTCCACCTCGT 86 >seq6806 Length=2266 Score = 149 bits (164), Expect = 6e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| | Sbjct 2011 AACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTC 2070 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||| | | | | |||| | ||| | || || | ||||| ||||||||||| | | Sbjct 2071 CAGCGATACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCTG 2129 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || ||||||| ||| ||||| ||||| || |||| ||||| || ||||| Sbjct 2130 ATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACT 2189 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||||| | || || || || || Sbjct 2190 ACAACATCCAGAAGGAGTCGACTCTTCACCTCGT 2223 >seq140 Length=17166 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| ||||| | | Sbjct 1436 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 1377 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| ||||||||||| | ||||| Sbjct 1376 GACACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 1318 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 1317 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACTCTGGCCGACTACAA 1258 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 ||||||||||||| | || || || || || |||| || | || |||||| Sbjct 1257 CATCCAGAAGGAGTCGACTCTCCACCTCGTCCTGCGACTGCGTGGTGGCGGC 1206 >seq7588 Length=2028 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || |||| ||||| ||| | Sbjct 34 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATTACTCTCGAGGTCGAGTCCAGC 93 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| || |||||||| | || || Sbjct 94 GACACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCGCCCGATCA 152 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 153 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAA 212 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 213 CATCCAGAAGGAGTCCACGCTCCACCTCGT 242 >seq4764 Length=3127 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || || || ||||| ||||| ||| |||| || || | Sbjct 298 AACAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTTGAGTC 239 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | ||||| | | |||| ||||| | || || | ||||| |||||||| ||| ||| Sbjct 238 GAGCGACACGATCGAGAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGG 180 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || ||||||| ||| ||||| ||||| || |||| || ||||| ||||| Sbjct 179 ATCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACT 120 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||||| | || || || || || Sbjct 119 ACAACATCCAGAAGGAGTCTACTCTCCACCTCGT 86 >seq6713 Length=2293 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| |||| ||||| | | Sbjct 239 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTCGAGAGCTCG 298 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| ||||||||||| | ||||| Sbjct 299 GACACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 357 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || || | || ||||| |||||||| Sbjct 358 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCCTGGCTGACTACAA 417 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 418 CATCCAGAAGGAGTCGACTCTCCACCTCGT 447 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || || || || |||| ||||| | | | Sbjct 11 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATTACTCTCGAGGTCGAGTCGAGC 70 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| | || || | ||||| |||||||||||| ||||||| Sbjct 71 GATACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 129 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| || ||||| ||||||||| Sbjct 130 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAA 189 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||| | || || || || || Sbjct 190 CATCCAAAAGGAGTCGACTCTCCACCTCGT 219 >seq6105 Length=2518 Score = 116 bits (128), Expect = 4e-21 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||||||| | |||||||| |||| ||||| | | Sbjct 2261 AATGCAGATCTTCGTGAAGACTCTCACGGGCCATACCATCACGCTCGAGGTCGAGCCGAG 2202 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 | ||| | | | | || | || | || ||||| | |||||||| | ||||| Sbjct 2201 CTACACGATTGAGGAGGTGCAGCAGAAGCTCCTGGACAAGGGAGGCATCCCGCCCGACCA 2142 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCT---GGACGACGAGCGCACCCTCAACGACTA 40865 || || ||||||| ||| ||||| ||||| ||| |||| |||||||| |||| | Sbjct 2141 GCTGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAGGACGGCCGCACCCTGGCCGACCA 2082 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 2081 CAACATCCAGAAGGAGTCCACCCTCCACCTCGT 2049 >seq3544 Length=3891 Score = 109 bits (120), Expect = 6e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCT-CACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 |||| | || ||| | || || || ||| | ||| || |||| |||| ||||| ||| Sbjct 662 AATGTATATCTTCTTGAAGACCCTGCACAG-CAAGGCCTGCACCCTCGAGGTCGAGTCCA 604 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | | ||||| | || || | ||||| ||||||||| || | || | Sbjct 603 GCGATACCATCGAGAGCGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCGCCCCCGATC 544 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | ||| ||| ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 543 AGCAGTGCCTCTTCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACA 484 Query 40868 ACATCCAGAAGGAGGCCAC 40886 |||||||||||||| |||| Sbjct 483 ACATCCAGAAGGAGTCCAC 465 >seq8684 Length=1752 Score = 105 bits (116), Expect = 7e-18 Identities = 145/196 (74%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCT-CACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 |||| | || ||| | || || || ||| | ||| || |||| |||| ||||| ||| Sbjct 224 AATGTATATCTTCTTGAAGACCCTGCACAG-CAAGGCCTGCACCCTCGAGGTCGAGTCCA 166 Query 40748 CCGACAGCGTGCAAACGC-TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 ||||| || | | || ||||| | || || | ||||| |||||||||||| | || Sbjct 165 GCGACA-CGATCGAGAGCGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCCGAT 107 Query 40807 CAGCAACGACTCATCTAC-GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| | ||| ||| | || ||||| ||||| || |||| ||||||||| ||||| Sbjct 106 CAGCAGTGCCTCTTCTTCCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTA 47 Query 40866 CAACATCCAGAAGGAG 40881 |||||||||||||||| Sbjct 46 CAACATCCAGAAGGAG 31 >seq1372 Length=6757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| || || || || || |||| ||||| | Sbjct 6512 AACAATGCAGATCTTCGTGAAGACCCTCACCGGTAAGACAATTACTCTCGAGGTCGAGTC 6571 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| | ||| | || || | ||||| |||||||||||| | | Sbjct 6572 CAGCGACACCATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTG 6630 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAA 40832 | ||||| || ||||||| ||||||||| Sbjct 6631 ATCAGCAGCGCCTCATCTTCGCGGGCAA 6658 >seq351 Length=11865 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/109 (80%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAG--C 40849 |||||||| |||||||| || ||||||| ||| ||||| ||||| || || || | Sbjct 8634 GGCATCCCACTCGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGA--ACCAGGCC 8577 Query 40850 GCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| |||||||||||||||||||||| |||| || || || || Sbjct 8576 GCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGT 8528 >seq85 Length=20598 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || ||||| | |||||||| || || |||| || ||||| ||||| || |||| ||| Sbjct 5578 GGTATCCCTCCTGACCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGC 5519 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || |||||||||||||||||||||| |||| ||||| || || |||| | | Sbjct 5518 ACACTGGCCGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGGCTCCGC 5459 Query 40912 GGCGGCGGC 40920 || |||||| Sbjct 5458 GGAGGCGGC 5450 >seq9032 Length=1681 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 40723 ACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCT 40781 ||||||| | |||| ||||| || ||| || | || ||| | ||| | || || Sbjct 612 ACCATCATCCTCGAGGTCGAGGCGTCCGCCACGATCGCGGACG-TGAAGCAGAAGATCTG 670 Query 40782 CGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGA 40841 ||||| ||||||| |||| | || |||| || ||||||| ||| ||| ||||| || Sbjct 671 GGACAAGGAGGGCAGCCCCCCTGATAAGCAGCGTCTCATCTTCGCCAGCACGCAGCTCGA 730 Query 40842 CGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| |||||||| |||||||||||||||| ||||||| || || Sbjct 731 GGACTGCCGCACCCTGGCCGACTACAACATCCAGGAGGAGGCGACTCT 778 >seq5976 Length=2572 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/109 (80%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAG--C 40849 |||| |||| || ||||||| || ||||||| ||| ||||| ||||| || || || | Sbjct 2368 GGCACCCCCTCG-ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGA--ACCAGGCC 2424 Query 40850 GCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| ||| |||||||||||||||||| |||| || || || || Sbjct 2425 GCACCCTCGCCGAGTACAACATCCAGAAGGAGTCCACCCTCCACCTCGT 2473 >seq7225 Length=2130 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||| |||| | || | ||| || ||||||| ||| ||| ||||| || Sbjct 663 GACAAGGAGGGCGCCCCCCCTGATCTGCAGCGTCTCATCTTCGCCAGCACGCAGCTCGAG 722 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887 |||| |||||||| |||||||||||||||| ||||||| ||| Sbjct 723 GACGGCCGCACCCTGGCCGACTACAACATCCAGGAGGAGGCGACG 767 >seq11192 Length=1313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/176 (73%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCG--AGAACCCCCGCCGGTTCGTGATTTTCCCCATACAAT-ACCCG 116632 |||||||||| || | |||||||| ||| |||||| | |||||||| | ||| | Sbjct 1041 GAGCCGCTGCCTCGAGGCAGAACCCCAACCGATTCGTGCTGTTCCCCATCCCGCCACCAG 1100 Query 116633 GACATGTGGCGCA-TGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGA 116691 ||| ||| | ||||||| ||||||||||| || |||||||| | |||||| || || Sbjct 1101 CGCATCTGGGAGACTGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGA 1160 Query 116692 CCTGTCCAAGGACACGAGCGACTGGGAG-CGCTTGAACGACAACGAGCGCCATTTC 116746 ||| | |||| || |||||||| ||| | ||| || ||||| | || ||| Sbjct 1161 TCTGAGCTCCGACATGAAGCACTGGGAGTCGC-TCAACAACGACGAGAGGCACTTC 1215 >seq2256 Length=5188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 183/272 (67%), Gaps = 9/272 (3%) Strand=Plus/Plus Query 139361 GGCCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGG 139420 ||||| || ||||| |||||||||||||| ||||||||||||||| | |||||| Sbjct 4717 GGCCTCAAGCCCGGCCCCCACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGC 4776 Query 139421 TGCACGTCGGCCGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCC 139480 ||| | || |||| |||||||||||| | | | ||||| | ||||| | Sbjct 4777 TGCGTGAGCGCGGGCGGCCACTTCAACCCCTTCGGTAAGAAGCACGGTGGACCCGAGGAT 4836 Query 139481 GAGATCAGGCACGTCGGCGACCTGGGCAACCTCG-AGTCGGCGGGCC--GCGACGCGCTC 139537 ||| | ||||| ||||| || |||||| ||| | || || | | ||| || | | Sbjct 4837 GAGGAGCGTCACGTTGGCGATCTCGGCAACGTCGTGGCCGACGAGACGGGCGTGGCCCGC 4896 Query 139538 ACCGAGGTGAGCCTGACGGACGGCGTCGTGTCCCTGTACGGTCCGCACAGCATCATCGGA 139597 ||| | | | | |||| | |||| |||| ||| || ||| ||||||||| Sbjct 4897 ACC------ACCATCAAGGACAGGCTCGTCACCCTCGGCGGCCCCCACTCCATCATCGGC 4950 Query 139598 CGGAGTCTGGTCGTGCACACGGACAGGGACGA 139629 ||| ||||||| ||| | ||| ||| || Sbjct 4951 AGGACCATGGTCGTTCACGCCGACGAGGATGA 4982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515102644536480