Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq15283 149 4e-31 seq1932 149 4e-31 seq7266 143 2e-29 seq4764 143 2e-29 seq6806 140 2e-28 seq3858 140 2e-28 seq6713 134 9e-27 seq6454 134 9e-27 seq4792 134 9e-27 seq4204 125 5e-24 seq1785 125 5e-24 seq140 125 5e-24 seq6105 114 8e-21 seq7588 111 1e-19 seq173 87.8 1e-12 seq1372 86.0 4e-12 >seq15283 Length=765 Score = 149 bits (164), Expect = 4e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | || || ||||| | || || ||||| ||||||||||| | Sbjct 227 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 168 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 167 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 108 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | |||| ||| | || ||||| Sbjct 107 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACC 48 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 47 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1 >seq1932 Length=5666 Score = 149 bits (164), Expect = 4e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | || || ||||| ||||||||||||| | Sbjct 5624 CCGCCACGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 5565 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | |||||| || ||||| ||||| |||||||||||| || Sbjct 5564 AGGGCACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 5505 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||||||||| | | | || | ||| | || ||||| Sbjct 5504 ATGCCTTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 5445 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 5444 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 5398 >seq7266 Length=2119 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | || || ||||| | || || ||||| ||||||||||||| | Sbjct 1598 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1539 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| ||||| |||||||| ||| || Sbjct 1538 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGGAGGG 1479 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||||||||| | | | || | |||| |||| ||||| Sbjct 1478 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACC 1419 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || ||||| ||||| ||||| Sbjct 1418 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 1372 >seq4764 Length=3127 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | |||| || ||||| ||||||||||||| | Sbjct 68 CCTCCGCGAAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 127 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| |||||||| || ||| Sbjct 128 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGA 187 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | |||| ||| |||| || || Sbjct 188 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCAACC 247 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| |||||||| || || ||||| ||||||||||| Sbjct 248 TCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 294 >seq6806 Length=2266 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | ||| || ||||| ||||||||||||| | Sbjct 2241 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 2182 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| ||||| |||||||| || || Sbjct 2181 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGAGGG 2122 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | || | |||| | || ||||| Sbjct 2121 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACC 2062 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 2061 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 2015 >seq3858 Length=3670 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || || ||||| | || || ||||| ||||||||||||| | Sbjct 936 CCACCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 877 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | |||||| || ||||| ||||| |||||||| || ||| Sbjct 876 AGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGATCCGGGGGG 817 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||||||||| | | | || | |||| | || ||||| Sbjct 816 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACC 757 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || || || ||||||||||| Sbjct 756 TCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 710 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| ||||||||||||| ||| ||| |||| Sbjct 693 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCC 634 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||||||||| ||| | || ||||||||| Sbjct 633 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 574 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | | |||| ||| |||| || || || | |||||||| Sbjct 573 TGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTC 514 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||| ||||| ||||| Sbjct 513 TTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 482 >seq6713 Length=2293 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | ||| || || || ||||||||||||| | Sbjct 237 CCGCCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGGCC 178 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 177 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 118 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | || | |||| |||| ||||| Sbjct 117 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACC 58 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || || ||||| || || ||||| ||||||||||| Sbjct 57 TCGAGAGTAATCGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 11 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| ||||||||||| | ||| ||| | || Sbjct 450 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGACCATCC 391 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| |||||||||||| || | || ||||||||| Sbjct 390 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 331 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | | || | || | ||||| || | ||||| || Sbjct 330 TGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTC 271 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 270 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 239 >seq6454 Length=2394 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| ||| ||||| ||||||||||||| Sbjct 68 CCTCCGCGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCG 127 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| |||||||| || ||| Sbjct 128 AGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGATCAGGGGGG 187 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | |||| ||| |||| || || Sbjct 188 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCAACC 247 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || || || ||||| ||||| ||||| Sbjct 248 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACGAAGATTTGCAT 294 >seq4792 Length=3108 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || || ||||| ||||||||||| | | Sbjct 1737 CCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 1678 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| ||||| ||||||||||| ||| Sbjct 1677 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGG 1618 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | |||| ||| | || ||||| Sbjct 1617 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACC 1558 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 1557 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1511 >seq4204 Length=3449 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 237 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 178 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 177 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 118 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | || | ||| |||| ||||| Sbjct 117 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCGCTCGACTCGACC 58 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || || || ||||| || ||||| ||||||||||| Sbjct 57 TCGAGAGTAATCGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 11 >seq1785 Length=5934 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | || || ||||| ||||||||||||| Sbjct 4350 CCGCCACGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4409 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | |||||| || || || ||||| |||||||||||| || Sbjct 4410 AGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGG 4469 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||||||||| | | | |||| ||| | || ||||| Sbjct 4470 ATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACC 4529 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || || || ||||| ||||| Sbjct 4530 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 4576 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| ||| || |||| || | ||||||||| ||||| Sbjct 4158 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 4217 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||| || ||| | | ||||||||| ||||| ||||| | | Sbjct 4218 ATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 4277 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| ||| ||||| || | |||||||| ||||||||||| || || || Sbjct 4278 TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 4337 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 4338 AAGATCTGCAT 4348 >seq140 Length=17166 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| || ||||| | ||| || ||||| ||||||||||||| | Sbjct 1210 CCACCACGCAGTCGCAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1269 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| ||||| |||||||||||| || Sbjct 1270 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1329 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | | | || | || | ||||| Sbjct 1330 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCGACC 1389 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || || || ||||||||||| Sbjct 1390 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1436 Score = 118 bits (130), Expect = 7e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAA--AGTACTTTCTTTCTGTATGTTGTAGTCGG 34220 ||||||||||| | || || ||||| | || ||| | ||| |||||| |||||| Sbjct 1438 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGAGGACT--CCGGCTGGATGTTGCAGTCGG 1495 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 || ||| |||| || | || ||| || ||||| ||||| |||||||| ||| | Sbjct 1496 CGAGGGTGCGGCCGTCCTCGAGCTCCTTACCCGCGAAGATGAGACGCTGCTGATCGGTAG 1555 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATCGGCTATCGAATCGGTCGATTCG 34339 | | | ||||||||| | ||||||||| | | || | || | |||| | |||||| Sbjct 1556 GAATACCCTCCTTGTCCTGGACCTTTTGCTTCACGCTCT-CGATGGTATCGCTGGATTCG 1614 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| |||| ||||| ||| ||||||||||||||||| Sbjct 1615 ACCTCGAGGGTGATGGTCTTGCAGGTGATAGTCTTCACAAAGATCTGCAT 1664 >seq6105 Length=2518 Score = 114 bits (126), Expect = 8e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC---AACTGCTTGCCTGCG 34255 || ||||| ||||||| ||||| ||| ||| |||| ||| | ||||||||| ||| Sbjct 2067 TCCTTCTGGATGTTGTGGTCGGCCAGGGTGCGGCCGTCCTCCTCGAGCTGCTTGCCGGCG 2126 Query 34256 AAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315 || ||||| ||| |||||||| || | || ||||||| | ||| |||| | Sbjct 2127 AAGATGAGGCGCAGCTGGTCGGGCGGGATGCCTCCCTTGTCCAGGAGCTTCTGCTGCACC 2186 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 || | |||| | | ||| ||||| || | ||||||||| | ||| |||||||| ||| Sbjct 2187 TCCTCAATCGTGTAGCTCGGCTCGACCTCGAGCGTGATGGTATGGCCCGTGAGAGTCTTC 2246 Query 34376 ACAAAGATCTGCATCGCTCGAATG-GTGCGT 34405 || ||||||||||| ||| | || |||||| Sbjct 2247 ACGAAGATCTGCATTGCTGGCTTGTGTGCGT 2277 >seq7588 Length=2028 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| ||| ||| |||| || | ||||||||| ||||| Sbjct 224 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 165 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| ||| || | || |||||||| ||||| ||||| | | Sbjct 164 ATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTC 105 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | || || || |||||||| || || || || Sbjct 104 TCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTCAGGGTCTTGACG 45 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 44 AAGATCTGCAT 34 >seq173 Length=15809 Score = 87.8 bits (96), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 34169 CGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGA 34228 |||||||| ||||| ||||| | || || || || |||| |||||||| |||| Sbjct 1491 CGCAGCCTGAGCACGAGGTGGAGCGTGCTCTCCGGTTGGATGTCGTAGTCGGCCAGCGTG 1550 Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTC 34288 | | |||| || | ||||||||| ||||| || || |||||||||||| |||| | || | Sbjct 1551 CAGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGCGGG-ATGCCC 1609 Query 34289 TCCTTGTC 34296 ||| |||| Sbjct 1610 TCCATGTC 1617 >seq1372 Length=6757 Score = 86.0 bits (94), Expect = 4e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34245 GCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCT 34304 ||||||| ||||| ||||| |||||||| || ||| | || ||||||||| |||| Sbjct 6660 GCTTGCCCGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCT 6601 Query 34305 TTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGG 34364 | ||||| | | | || | ||| | || ||||| || | || || || || |||| Sbjct 6600 TCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATTGTCTTACCGG 6541 Query 34365 TGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||| ||||||||||| Sbjct 6540 TGAGGGTCTTCACGAAGATCTGCAT 6516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323000740210880