Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4651 293 2e-74 seq378 268 8e-67 seq3858 136 4e-27 seq140 132 4e-26 seq6454 123 2e-23 seq1785 120 3e-22 seq6806 116 3e-21 seq6713 109 5e-19 seq1932 109 5e-19 seq7588 107 2e-18 seq7266 104 2e-17 seq15283 96.9 3e-15 seq4792 95.1 1e-14 seq4204 95.1 1e-14 seq85 86.0 6e-12 seq6105 82.4 7e-11 >seq4651 Length=3183 Score = 293 bits (324), Expect = 2e-74 Identities = 564/827 (68%), Gaps = 5/827 (1%) Strand=Plus/Plus Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628 ||| ||| | |||||||| ||||| || || || || ||||| | ||| ||||| || || Sbjct 1040 CATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCT 1099 Query 57629 GTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACA 57688 | || ||| | ||||| || ||||| | ||||| | || || || || Sbjct 1100 GAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTCATCAAGCA 1159 Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748 ||| ||||| || ||||| || ||| || || || ||||||| | | || | || Sbjct 1160 CGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCTT 1219 Query 57749 TTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGA 57808 | || ||||| ||| | |||||| | ||||| ||||| |||||| | ||||| || Sbjct 1220 CATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCATCGA 1279 Query 57809 AAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA 57868 ||| | || || || ||||| ||||| |||||||| || ||||| |||||| || ||| Sbjct 1280 GAACATCCACTCCGAGATGTACTCGCTCCTCATCGACACCTACGTCAAGGACTCCGTCGA 1339 Query 57869 GAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928 ||| | || ||| ||| ||||| || ||||| || || |||||||| || || Sbjct 1340 GAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTG 1399 Query 57929 GTCAATCAAATGGATAAA-AAGCGCCACGGCCA--CGTTCGCCGAGAGGCTAATCGCGTT 57985 | | || || ||||| || ||| || | | | ||||||||| | || ||| || Sbjct 1400 GGCGATGAAGTGGATCAACAAGGAGGGCGTCGAGACCTTCGCCGAGCGTCTCGTCGGATT 1459 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGA 58044 |||||||||||| || || ||||| || |||||||| ||| | || || ||| | |||| Sbjct 1460 CGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGC-TCCATCTTCTGGCTCAAGA 1518 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104 | |||||||| ||||||||||| | || || |||||| |||| ||||| ||||| | Sbjct 1519 AGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCC 1578 Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATC 58164 |||| || || || ||||| | ||| | | ||||| || || || || Sbjct 1579 TCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCAACAAGCCCTCGACCGACG 1638 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 | | | || ||| |||||| |||| ||| || || || || || ||||| | | Sbjct 1639 TGCCCAAGCAGATCATCCTCGAGGCTGTCGAGATTGAGAAGGAATTCGTGACCGAGTCGC 1698 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | || |||||| | |||| |||||| || | |||| ||||||| ||||| || | Sbjct 1699 TCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTACATCGAGTTCGTCG 1758 Query 58285 CCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTG 58344 ||||| | || | || || | || || |||||| || || ||||| Sbjct 1759 CCGACCGCCTCCTCGCCGCCCTCGGCTGCGACAAGCACTACAACCAGACCAACCCGTTCC 1818 Query 58345 ATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391 | ||| | || ||||| |||||||||||||| ||||| |||||| Sbjct 1819 CGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTCTTCGAA 1865 >seq378 Length=11515 Score = 268 bits (296), Expect = 8e-67 Identities = 912/1405 (65%), Gaps = 29/1405 (2%) Strand=Plus/Minus Query 22097 GCGGCGGTCT--TG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGA 22153 ||||||| || || || || || ||||| || ||||| ||||| || ||||||||| Sbjct 5762 GCGGCGGCCTCCTGATCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGG 5703 Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213 || |||||||| ||||| || ||| | ||| ||||| || || ||||| || | || Sbjct 5702 TAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTG 5643 Query 22214 CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCT 22273 || | ||| | ||||||| || |||| |||||| ||||| ||||| | || Sbjct 5642 GCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAG 5583 Query 22274 CGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGT 22333 |||||||||||||| | || | ||| || | ||||| |||||||||||||| Sbjct 5582 CGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTGTACAGC 5523 Query 22334 TGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATC 22393 | | |||| || || ||| ||||| | |||||| || ||||| | | || | Sbjct 5522 TTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAGACGAGC 5463 Query 22394 AAATTTTTAATCGTATCGTTCCACAAAC--CGATGGCGGTCAAATCTTTGACCAGATGAC 22451 || || | || ||| | | || || || | || | || || Sbjct 5462 TTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGG--AGCTCGCGCAGAAGGTGCT 5405 Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 ||| || || || ||||||| | || |||||| ||| ||||||| ||| | | Sbjct 5404 CGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAGG 5345 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | || || | || ||||| ||||| ||||| | |||||| || || ||||| ||||||| Sbjct 5344 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCA 5285 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || |||| | | |||||||| Sbjct 5284 CGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCCC 5225 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCG 22691 || || ||||| ||| | |||| | ||| || | | ||| ||| | Sbjct 5224 ACCTGTCCGACGG---CACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGG 5168 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATC-GCG---GCAAGTTCGCAGCTCGCC 22747 | ||| ||||| || | ||| | || | | | ||| || ||||| || || Sbjct 5167 GCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCG-AG---GCG 5112 Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACG 22807 ||| ||| |||| || || ||||||||||| ||| | ||| ||| || || Sbjct 5111 ACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCG 5052 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 || || |||| ||||| |||| ||| |||| |||| ||||| || || || ||| Sbjct 5051 CTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCG 4992 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCG 22927 || || | || || ||||| |||||||||| || || | || ||| Sbjct 4991 ATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCACGGGGTAGTAGTTGATGTCG 4932 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || |||| | ||| |||| || | ||| | | ||| Sbjct 4931 ATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTC- 4873 Query 22988 TAAACGC-CCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGC 23046 |||| | ||| | || | |||||| | |||| |||||| || ||||| ||||| Sbjct 4872 -AAACTCGCCGTTGGT--GATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCAGACGGC 4816 Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTAC-ACTTTATCG 23105 ||||||||| |||||||||| || | || || || || || | || ||| || | Sbjct 4815 CACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTT-CGACGACTGAATGG 4757 Query 23106 TGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGC 23164 || || | |||| ||||||| || | ||||| | |||||||| |||||||| ||| Sbjct 4756 TG-CCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGC 4698 Query 23165 GTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAG-CGTGAACACG 23223 ||||| ||||||| ||||||||||| ||| || ||||| ||| | | ||| |||| Sbjct 4697 GTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACG 4638 Query 23224 TCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA 23283 || || | ||| || | |||||| | |||| | | || || || || | Sbjct 4637 CGGCGCG-CGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCA 4579 Query 23284 ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTC 23343 ||||| ||||||||| | | | || || | ||| ||| | | | || Sbjct 4578 CGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCCGTCTC 4519 Query 23344 AACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCAC 23403 ||||| |||| || || || || ||||| || ||||||| || ||||||||||| Sbjct 4518 CACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTT 4459 Query 23404 CTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGG 23463 |||||| |||||| |||||| |||| || | ||||| || | |||||| ||||| || Sbjct 4458 CTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGG 4399 Query 23464 CTCGAGGTAAACGGCAAACGCGCCC 23488 ||||||||| | ||| || || ||| Sbjct 4398 CTCGAGGTAGATGGCGAAAGCACCC 4374 Score = 140 bits (154), Expect = 3e-28 Identities = 309/461 (67%), Gaps = 8/461 (2%) Strand=Plus/Minus Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563 || || |||||||| ||||| |||| |||||| || | ||||| || | |||||||||| Sbjct 4257 CCTTGGTCGACGTAGCGGGCAGTGTCGTTGTAGACGCGGAGCATGGGGATGAGACCGTTG 4198 Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTG----CTCGAACGTTGTGAACGTG 23619 || | |||| | | ||| | | || ||| | || | | ||| || Sbjct 4197 GAGGTGCCG--TTGGT--GCCGCGGATGTACGAGTTGGAGGCGCGGATGCGGTGCGCGGC 4142 Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679 || || ||||| ||| |||| || || || | ||||| || || || ||||||||||| Sbjct 4141 GAGGCCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGAT 4082 Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGG 23739 ||||||||| |||||| || | | || || ||| ||||| |||| |||| || Sbjct 4081 GCCCTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGG 4022 Query 23740 CGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATT 23799 || |||| ||| || |||||| ||||||| || ||| | ||||| || | Sbjct 4021 AGTGCCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTC 3962 Query 23800 GTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859 ||| || ||||| |||| |||| || ||| | |||||||| |||||||| | Sbjct 3961 GTAGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGGCCGATGGCCACGCGCATGAG 3902 Query 23860 CATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCAT 23919 ||||| || || | |||||| | ||||| | |||| || || || || | | Sbjct 3901 CATGTGCTGGGGACGCTCGACGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAG 3842 Query 23920 CGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || || || ||||| ||| ||||| ||||| || |||| Sbjct 3841 GGTCTTGAAGCCAAAGTAGGTGTAGTTGAAGTCGCGCTCGT 3801 >seq3858 Length=3670 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 || ||||||||||| ||||| ||||| ||||| ||||| || |||||| |||| ||||| Sbjct 476 TCGAACATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAG 535 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || ||||| |||| | ||||| |||| || ||||||||| ||| | || || Sbjct 536 TCGAGCGACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCT 595 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 |||||||||||||| || ||||| ||||| ||| | || ||| || || ||| Sbjct 596 GACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGAC 655 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || |||||||| || || || || Sbjct 656 TACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || | Sbjct 709 CATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAG 768 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || || | || ||||||||| ||| | || || || || Sbjct 769 CGATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 828 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || || ||| | || ||| || || ||| || || Sbjct 829 GCAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAA 888 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || || || || Sbjct 889 CATCCAGAAGGAGTCCACCCTCCACCTCGTCCT 921 >seq140 Length=17166 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || || Sbjct 1437 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTC 1378 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || |||| || ||||||||| ||| | ||||||||||| Sbjct 1377 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 1318 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| |||| || ||| || || Sbjct 1317 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGGACTCTGGCCGACTACAA 1258 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || |||||||| || || || || ||||| | || || Sbjct 1257 CATCCAGAAGGAGTCGACTCTCCACCTCGTCCTGCGACTGCGTGGTGG 1210 >seq6454 Length=2394 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 || ||||||||||| ||||| ||||| || || ||||| || |||||| |||| ||||| Sbjct 300 TCGAACATGCAAATCTTCGTGAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTTGAG 241 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || ||||| |||| | ||||| |||| || ||||||||| ||| | || || Sbjct 240 TCGAGCGACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCT 181 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 || |||||||| || || ||||| ||||| ||| | || ||| || | ||| Sbjct 180 GATCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGAC 121 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || ||||||||||| || || || || Sbjct 120 TACAACATCCAGAAGGAATCGACTCTCCACCTCGTCCT 83 >seq1785 Length=5934 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| || |||||| |||| || || | | Sbjct 4576 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 4517 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || | || ||||||||||||| | || ||||||||| Sbjct 4516 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 4457 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| | || ||| || | ||| || ||| Sbjct 4456 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 4397 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || ||||| || || ||| | ||| | ||||||| Sbjct 4396 ATCCAGAAGGAGTCCACCCTTCACCTCGTTCTTCGTCTGCGTGGCGGTA 4348 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| |||| || || ||||| Sbjct 4348 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 4289 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| || | || || || ||| Sbjct 4288 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAG 4229 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || ||| | || || ||| || ||| Sbjct 4228 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAAC 4169 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || || || || || || || ||| Sbjct 4168 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCTT 4136 >seq6806 Length=2266 Score = 116 bits (128), Expect = 3e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || ||| ||||| || ||||| ||||| || || ||||| || |||||| |||| || | Sbjct 2007 AACCAACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCG 2066 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | | ||| | |||| | || || |||| || ||||||||| ||| | || | Sbjct 2067 AGTCCAGCGATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTC 2126 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 | || ||||||||||| || ||||||||||| ||| | || ||| ||| || || Sbjct 2127 CTGATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCG 2186 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || ||||| || || || ||||||||||| || || || | || | ||||||| Sbjct 2187 ACTACAACATCCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTTCGTGGCGGTA 2243 >seq6713 Length=2293 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| |||| || || || Sbjct 238 CATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTCGAGAGCTC 297 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || |||| || ||||||||| ||| | || |||||||| Sbjct 298 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 357 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || || | || || || || || Sbjct 358 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCCTGGCTGACTACAA 417 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || |||||||| || || || || Sbjct 418 CATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 450 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || ||||| || |||| || || || Sbjct 10 CATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATTACTCTCGAGGTCGAGTCGAG 69 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || |||| || ||||||||| ||| | || || ||||| Sbjct 70 CGATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 129 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| || || ||| || || Sbjct 130 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAA 189 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| || |||||||| || || || || Sbjct 190 CATCCAAAAGGAGTCGACTCTCCACCTCGTCCT 222 >seq1932 Length=5666 Score = 109 bits (120), Expect = 5e-19 Identities = 170/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 31185 AATCAAACA-TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 || |||||| |||| || ||||| ||||| || || ||||| || |||||| | || || Sbjct 5389 AACCAAACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTC 5448 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || | ||||| |||| | || || || | || ||||||||||||| | || Sbjct 5449 GAGTCCAGCGACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAAGGCATCCCT 5508 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC-TCTATGACTATGAG 31362 ||||||||||||||||| || ||||| || || ||| | || ||| | || | || Sbjct 5509 CCCGACCAGCAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGTG-CCCTGGC 5567 Query 31363 CGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || ||||| || || || || || || || || || ||| | ||| | ||||||| Sbjct 5568 CGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTTCTTCGTCTGCGTGGCGGTA 5626 >seq7588 Length=2028 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| ||||| || |||| || || | | Sbjct 34 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATTACTCTCGAGGTCGAGTCCAGC 93 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||||||| | |||||||| ||| Sbjct 94 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCGCCCGATCAG 153 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | || ||| || || ||| || ||| Sbjct 154 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 213 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || || || || Sbjct 214 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCT 245 >seq7266 Length=2119 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| || |||||| |||| || || || | Sbjct 1372 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 1431 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || | || ||||||||| ||| | || ||||| ||| Sbjct 1432 GATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 1491 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | || ||| || || ||| || ||| Sbjct 1492 CAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 1551 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || || || || || | ||| | ||||| Sbjct 1552 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTGCGCGGCGG 1598 >seq15283 Length=765 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| |||| || || | | Sbjct 1 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 60 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| ||| | || || |||||| Sbjct 61 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 120 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || ||||| ||||| ||| | || ||| Sbjct 121 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGAC 156 >seq4792 Length=3108 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| |||| || || | | Sbjct 1511 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 1570 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| ||| | || || |||||| Sbjct 1571 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1630 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | || ||| ||| || || || ||| Sbjct 1631 CAGCGTCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGCACTCTGGCTGACTACAAC 1690 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || || || || Sbjct 1691 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCT 1722 >seq4204 Length=3449 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || ||||| || |||| || || || Sbjct 10 CATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATTACTCTCGAGGTCGAGTCGAG 69 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | || || |||| || ||||||||| ||| | || || ||||| Sbjct 70 CGACACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 129 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||| || || ||||| ||||| ||| | || ||| Sbjct 130 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAC 166 >seq85 Length=20598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| || |||||| |||| || ||| | || Sbjct 5769 CATGCAAATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTAGAATCCTC 5710 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGC 31301 ||||| |||| | || || |||| || ||||||||| || |||| Sbjct 5709 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTGTGC 5660 >seq6105 Length=2518 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||| | || ||||| |||| || || ||| | Sbjct 2260 ATGCAGATCTTCGTGAAGACTCTCACGGGCCATACCATCACGCTCGAGGTCGAGCCGAGC 2201 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | || ||| | |||| | |||||||| |||| | |||||||||||| Sbjct 2200 TACACGATTGAGGAGGTGCAGCAGAAGCTCCTGGACAAGGGAGGCATCCCGCCCGACCAG 2141 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | ||| || || ||||| ||||| ||| | || || Sbjct 2140 CTGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGA 2106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445665556496160