Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq4769 86.0 1e-11 >seq4769 Length=3122 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 77351 CGCCGGGCACCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGA 77410 ||||||| | || || ||||||||||| ||||||||||| || |||||||||||||| | Sbjct 2306 CGCCGGGAGCGAGAAGCGTGGAGTAGCAGAGGTTGTGGGCAATCATGATGGAGGGGTACA 2247 Query 77411 GGCTGGCGAAGTCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGA 77470 | ||| || |||| | || | ||| ||| ||||||| || | ||| | | | Sbjct 2246 GCGAGGCAAAATCGAGGGTGGCGATGGGCACGTCGTAGTAGGCCGTCTTGGGGGCAATCA 2187 Query 77471 CGGTGGCACCCTGGTAG 77487 || |||| |||| |||| Sbjct 2186 CGATGGCGCCCTTGTAG 2170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771175901255760