Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq4769 86.0 9e-12 >seq4769 Length=3122 Score = 86.0 bits (94), Expect = 9e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 79713 AGCAGGGTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAAAG 79772 || || |||||||||||||||||||| || || |||||||| ||||| || |||||| Sbjct 2295 AGAAGCGTGGAGTAGCAGAGGTTGTGGGCAATCATGATGGAGGGGTACAGCGAGGCAAAA 2236 Query 79773 TCGAACACGGCCACGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACACCGTGGCGCCC 79832 |||| ||| | ||| ||| |||||| || || ||| ||| ||| |||||||| Sbjct 2235 TCGAGGGTGGCGATGGGCACGTCGTAGTAGGCCGTCTTGGGGGCAATCACGATGGCGCCC 2176 Query 79833 TGGTA 79837 | ||| Sbjct 2175 TTGTA 2171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753768640104480