Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq208 82.4 7e-11 >seq208 Length=14689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 68078 CGCGCCGTGGGATATCTTACACCACTGTTCCATCTCTCCGATCTTTATACCGCCGTCTCG 68137 |||||||||||| ||| | || | ||||||||||||| | | | ||| ||||| || Sbjct 355 CGCGCCGTGGGAGATCATGCAGTCGCGCTCCATCTCTCCGAACCTGAGACCACCGTCGCG 414 Query 68138 CGATCGTCCCGCTACGGGCTGTCGAGTAAGGGCGTCCACCGGACC-CGACACGCGGCTGT 68196 |||||| ||| | || ||||| | || || | |||||| || ||| |||| || Sbjct 415 CGATCGGCCCTCCACTGGCTGCCTCGTGAGAATCTGCACCGGGCCGCGA-GCGCGCGAGT 473 Query 68197 GAATTTTGCCGGACACCATGTGTCTCAGTCTCTGGTA 68233 | || ||| || ||||||||| |||| |||||||| Sbjct 474 GGATCTTGTCGTCCACCATGTGCTTCAGCCTCTGGTA 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448189785323280