Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12703 132 8e-27 seq6830 132 8e-27 >seq12703 Length=1119 Score = 132 bits (146), Expect = 8e-27 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || |||||| | || ||||| || ||| Sbjct 28 CTCCGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGTAGGCTCGCTCGCCGCGGT 87 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| |||| || || |||| ||||||| || | || | ||| ||||| Sbjct 88 GGTGTCAAGCGTATCTCGGGCATGATCTACGAAGAGACCCGCGGCGTGCTCAAGGTCTTC 147 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || | ||| ||||||||||| | ||||| ||| Sbjct 148 CTCGAGAACGTCATCCGCGACGCCGTGACCTACACCGAGCACGCCCGCAGGAAGACCGTC 207 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || ||||||| ||||||| || | || | || ||||| Sbjct 208 ACTGCCATGGACGTCGTCTACGCGCTCAAGAGGCAGGGCCG 248 >seq6830 Length=2255 Score = 132 bits (146), Expect = 8e-27 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || |||||| | || ||||| || ||| Sbjct 1276 CTCCGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGTAGGCTCGCTCGCCGCGGT 1335 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| |||| || || |||| ||||||| || | || | ||| ||||| Sbjct 1336 GGTGTCAAGCGTATCTCGGGCATGATCTACGAAGAGACCCGCGGCGTGCTCAAGGTCTTC 1395 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || | ||| ||||||||||| | ||||| ||| Sbjct 1396 CTCGAGAACGTCATCCGCGACGCCGTGACCTACACCGAGCACGCCCGCAGGAAGACCGTC 1455 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || ||||||| ||||||| || | || | || ||||| Sbjct 1456 ACTGCCATGGACGTCGTCTACGCGCTCAAGAGGCAGGGCCG 1496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79058652871914