Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1785 152 5e-32 seq7266 136 4e-27 seq7588 125 7e-24 seq1932 125 7e-24 seq15283 122 9e-23 seq6806 120 3e-22 seq3858 118 1e-21 seq6713 116 4e-21 seq140 113 5e-20 seq6454 109 5e-19 seq4764 109 5e-19 seq4204 104 2e-17 seq4792 100 3e-16 seq8684 91.5 1e-13 seq2712 91.5 1e-13 seq3363 87.8 2e-12 seq3544 86.0 6e-12 seq4863 84.2 2e-11 >seq1785 Length=5934 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||| || || |||| || || || || || |||||||| || || Sbjct 4349 ACCGCCACGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 4408 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| || |||||||| || ||| | ||||| ||||||||||||||||| Sbjct 4409 GAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGG 4468 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || |||||||| || ||| | || || | || || || Sbjct 4469 GATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGAC 4528 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | |||||||||||||| || || ||||| ||||||||| Sbjct 4529 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATT 4577 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | ||| || || || || |||||||| || || | |||||| |||| Sbjct 4136 AAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTC 4195 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || || |||||||| || || ||||| || || || || Sbjct 4196 CTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTC 4255 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||||| || ||| | || || | || || || | ||| | ||| Sbjct 4256 CTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGT 4315 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || ||||| || ||||| Sbjct 4316 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4348 >seq7266 Length=2119 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | || || || || | || || || || || |||||||| || || Sbjct 1598 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1539 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || |||||||| ||||| | ||||| |||||||| |||||||| Sbjct 1538 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGGAGGG 1479 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || |||||||| || ||| | ||||| | | || || Sbjct 1478 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACC 1419 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | |||||||||||||| || || ||||| ||||||||| Sbjct 1418 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 1371 >seq7588 Length=2028 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || || | ||| || || || || |||||||| || || | |||||| |||| Sbjct 245 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCC 186 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | ||||| |||||||| ||||| || || ||||| || || Sbjct 185 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCC 126 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| || ||| | || || | || || || || | ||| | ||| Sbjct 125 TGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATCGTC 66 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || ||||| || ||||| Sbjct 65 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 34 >seq1932 Length=5666 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||| || || || | || || || || || |||||||| || || Sbjct 5625 ACCGCCACGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 5566 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||| || || | ||||| ||||||||||||||||| Sbjct 5565 CAGGGCACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGGTCGGGAGG 5506 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || |||||||| || ||| | || || | || || || Sbjct 5505 GATGCCTTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 5446 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | |||||||||||| | || || ||||| || |||||| Sbjct 5445 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 5397 >seq15283 Length=765 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | || || || || | || || || || || |||||||| || ||| Sbjct 227 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 168 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 167 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 108 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||||| || ||| | || || | || || || Sbjct 107 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACC 48 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 47 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1 >seq6806 Length=2266 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || |||| ||||| || || || |||||||| || || Sbjct 2242 ACCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 2183 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || ||||||||||| || | ||||| |||||||| || ||||| Sbjct 2182 CAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGAGG 2123 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||||| || ||| | ||||| | || || || Sbjct 2122 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGAC 2063 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | |||||||||||| | || || ||||| || |||||| Sbjct 2062 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 2014 >seq3858 Length=3670 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || || | |||||| |||| || |||||||||||| Sbjct 678 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 619 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || || || || || || || ||||| Sbjct 618 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 559 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | | || || || | || | ||||||||| |||| || Sbjct 558 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 499 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| |||||||| || Sbjct 498 TTCACGAAGATTTGCATGTT 479 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | || || || || | || || || || || |||||||| || || Sbjct 936 CCACCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 877 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || |||||||| || || | ||||| |||||||| || || || Sbjct 876 AGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGATCCGGGGGG 817 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || |||||||| || ||| | ||||| | || || || Sbjct 816 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACC 757 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || ||||| || ||||| Sbjct 756 TCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 710 >seq6713 Length=2293 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || || | ||| || |||| || |||||||||||| Sbjct 207 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 148 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || || || || || || || ||||| Sbjct 147 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 88 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||||| | | || || || | ||| | ||||| ||||||| || Sbjct 87 ACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCGGTCAGGGTC 28 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 27 TTCACGAAGATCTGCAT 11 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || || | ||| || | || || |||||||||||| Sbjct 435 GTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGACCATCCTCGAGCTGCTTGCCG 376 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||||||||| || || || || || || || || ||||| Sbjct 375 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 316 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || || || | || | ||||||||||| | || Sbjct 315 ACGTTCTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTC 256 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 255 TTGACGAAGATCTGCAT 239 >seq140 Length=17166 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| || || || || || | ||||| || || || |||||||| || || Sbjct 1210 CCACCACGCAGTCGCAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1269 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||| || |||||||||||||| | ||||| |||||||||||||| || Sbjct 1270 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1329 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||||| || ||| | || || | || || Sbjct 1330 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCGACC 1389 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || ||||| || ||||| Sbjct 1390 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1436 >seq6454 Length=2394 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| || || |||||||| || |||| ||| || |||| || ||||||||||| Sbjct 98 GTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCC 157 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||| || || || || || || || || || || || ||||| Sbjct 158 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 217 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | | || || || | || | ||||||||| || | || Sbjct 218 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTC 277 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| |||||||| || Sbjct 278 TTCACGAAGATTTGCATGTT 297 >seq4764 Length=3127 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || | ||| || |||| || |||||||||||| Sbjct 98 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 157 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||| || || ||||| || || || || || || || ||||| Sbjct 158 GCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTG 217 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | | || || || | || | |||||||||||||| || Sbjct 218 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTC 277 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| || |||||| Sbjct 278 TTCACGAAGATCTGCATT 295 >seq4204 Length=3449 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || || | ||| || || || || |||||||| || |||| ||||| |||| Sbjct 222 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCC 163 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | ||||| ||||||||||| || || || || || || || Sbjct 162 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 103 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| || ||| | || || | | || || || | ||| | ||| Sbjct 102 TGGATCTTCTGCTTCACGTTCTCGATAGTGTCGCTCGACTCGACCTCGAGAGTAATCGTC 43 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || ||||| || ||||| Sbjct 42 TTACCCGTGAGGGTCTTCACGAAGATCTGCAT 11 >seq4792 Length=3108 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || | ||||| |||| || |||||||| || Sbjct 1707 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGCTTACCC 1648 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || || || || || || || ||||| Sbjct 1647 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 1588 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || || || || | || | |||||||||||| | || Sbjct 1587 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1528 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| || |||||| Sbjct 1527 TTCACGAAGATCTGCATT 1510 >seq8684 Length=1752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || || || ||||| || || || |||||||| || |||| |||||| |||| || ||| Sbjct 17 AGGTGGATAGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGC 76 Query 64298 TGCTTGCCGGCATAA-ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTAT 64356 ||||||||||| || | ||| | |||||| ||||| || || || || || || || || Sbjct 77 TGCTTGCCGGCGGAAGAAGAGGCACTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGAT 136 Query 64357 TTTTTGCTTTAC 64368 || ||||| || Sbjct 137 CTTCTGCTTGAC 148 >seq2712 Length=4625 Score = 91.5 bits (100), Expect = 1e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || ||||||||||| |||| ||| || |||| ||||||||||||||||| |||| Sbjct 2455 TTCTGGATGTTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATC 2514 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTT 64343 || |||||||| || |||||||| |||| Sbjct 2515 AGACGCTGCTGATCCGGAGGAATGCCTT 2542 >seq3363 Length=4021 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || || ||||||||||| || | ||| | |||| Sbjct 2239 AGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCTGCCGTCC 2180 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||||||||||||||||| |||| || |||||||| || |||||||| ||| Sbjct 2179 TCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATGCCT 2129 >seq3544 Length=3891 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || || || || || || || || |||||||| || |||| |||||| |||| || ||| Sbjct 456 AGGTGGATAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGC 515 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||||||||| | | ||| | |||||| ||||| | || || || || || || || Sbjct 516 TGCTTGCCGGCGAAGAAGAGGCACTGCTGATCGGGGGCGATGCCCTCCTTGTCCTGGATC 575 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||||| || ||| | ||||| | || || || || | || || ||||| | Sbjct 576 TTCTGCTTGACGCTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGCAGGCCTTGCTG 635 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || | ||| || | |||| Sbjct 636 TGCAGGGTCTTCAAGAAGATATACATT 662 >seq4863 Length=3068 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 64220 CCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACG 64279 ||||| | ||| ||||| || || | || || || || || |||||||| || |||| | Sbjct 1602 CCGCGAAGTCTCAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTACTCGGCGAGG 1543 Query 64280 GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 ||||| | ||| |||||||||||||| | | ||| ||||||| ||||||||| Sbjct 1542 GTGCGGCCTGGTTCGAGCTGCTTGCCGGCGAAGACGAGGCGCTGCTCGTCGGGAGG 1487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499531767855120