Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6713 145 7e-30 seq140 145 7e-30 seq4651 141 9e-29 seq7588 132 5e-26 seq6806 131 2e-25 seq7266 125 7e-24 seq4764 125 7e-24 seq1785 123 2e-23 seq3858 118 1e-21 seq4204 114 1e-20 seq15283 113 4e-20 seq4792 113 4e-20 seq6454 100 3e-16 seq1372 91.5 1e-13 seq378 84.2 2e-11 >seq6713 Length=2293 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| || ||| ||| || ||||| || || Sbjct 435 GTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGACCATCCTCGAGCTGCTTGCCG 376 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| ||||||||||||||| ||| |||||||| Sbjct 375 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 316 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||||| |||||||| |||| ||| | || |||||||| || || Sbjct 315 ACGTTCTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTC 256 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 255 TTGACGAAGATCTGCATG 238 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || ||||| ||| ||| || || || || ||||| || || Sbjct 207 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 148 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| |||||||| Sbjct 147 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 88 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | |||||| |||| || | ||| || |||||||| || Sbjct 87 ACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCGGTCAGGGTC 28 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 27 TTCACGAAGATCTGCATG 10 >seq140 Length=17166 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | || | || ||||| || || || ||||| ||| || Sbjct 1210 CCACCACGCAGTCGCAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1269 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| |||| | |||||||| ||||| || Sbjct 1270 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1329 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| |||||||| | | |||| |||||||| |||||||| Sbjct 1330 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCGACC 1389 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| ||| | || ||||||||||| || || || || ||||||||| Sbjct 1390 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 1437 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||| || || ||| |||| | ||||||||||||| ||| || ||||||||| Sbjct 1510 TCCTCGAGCTCCTTACCCGCGAAGATGAGACGCTGCTGATCGGTAGGAATACCCTCCTTG 1569 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| || || ||||| | |||| ||| || | ||||| |||| ||| | Sbjct 1570 TCCTGGACCTTTTGCTTCACGCTCTCGATGGTATCGCTGGATTCGACCTCGAGGGTGATG 1629 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | ||| || ||||| |||||||| Sbjct 1630 GTCTTGCAGGTGATAGTCTTCACAAAGATCTGCAT 1664 >seq4651 Length=3183 Score = 141 bits (156), Expect = 9e-29 Identities = 418/626 (67%), Gaps = 34/626 (5%) Strand=Plus/Plus Query 46970 CATCGAATGCATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGAC-- 47027 |||||| ||||||| | || |||||| || ||||| || || | |||| ||| Sbjct 1274 CATCGAGAACATCCACTCCGAGATGTACTCGCTCCTCATCGACACCTACGTCAAGGACTC 1333 Query 47028 -GAAGAGAAGCAAGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAA 47086 | |||||| | || | ||| | || |||||| | |||||| || | || Sbjct 1334 CGTCGAGAAGGAC-CGCCTCTTCCG--CGCCATCGAGACCGTGCCCTCGGTCAAGAAGAA 1390 Query 47087 GGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTC---ACTCTGGCCGAACGTTT 47143 |||||| ||||| ||||||| || | || || |||| || | ||||| ||| | Sbjct 1391 GGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCGTCGAGACCTTCGCCGAGCGTCT 1450 Query 47144 GATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGGCGATATTTT 47202 ||| |||||| |||||||||| |||||||||| |||||||| ||| | || || | Sbjct 1451 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCC-ATCTTCT 1509 Query 47203 ACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAG 47262 | || | || | |||||||||||| | || || |||||| | ||| | | Sbjct 1510 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 1569 Query 47263 ACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAA-AAG 47321 | || ||||| ||| | |||| ||||| ||| || | |||| | ||| |||| ||| Sbjct 1570 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTC--CT-CTACACCATGCTCG-TCAACAAG 1625 Query 47322 ---TTG---GACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATG 47375 | | |||||||||| ||| | || | ||| || |||| ||||||| | Sbjct 1626 CCCTCGACCGACGTGCCCA-----AGC-AGATCATCCTCGAGGCTGTCGAGATTGAGAAG 1679 Query 47376 GAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGA 47435 || || | ||||| | || |||| | | | || |||||||| || | ||| | Sbjct 1680 GAATTCGTGACCGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGC 1739 Query 47436 AAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCC--CAAGATTT 47493 |||||||||| || |||||||||||||| |||| | || | | | |||| | Sbjct 1740 CAGTACATCGAGTTCGTCGCCGACCGCCTCCTCG--CCGCCCTCGGCTGCGACAAGCACT 1797 Query 47494 ACCACACCGA-GAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAAC 47552 || || | || || || ||| || ||| | ||| || |||||||||||||||||| Sbjct 1798 ACAAC-CAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAAC 1856 Query 47553 TTTTTCGAGAAGCGCGTCGGCGAATA 47578 || ||||| ||||||||||| || Sbjct 1857 TTCTTCGAACGCCGCGTCGGCGAGTA 1882 >seq7588 Length=2028 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| ||| ||| ||||| || || ||||| || || Sbjct 231 CGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 172 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| |||| | |||||||||||||| || ||||| ||||||||| ||| |||||||| Sbjct 171 GGCGAAGATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTCTGCTT 112 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| |||||| | |||||| |||| || | ||| ||||||||||| || Sbjct 111 CACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTCAGGGT 52 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 51 CTTGACGAAGATCTGCAT 34 >seq6806 Length=2266 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| || || ||||| || ||| Sbjct 2211 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCA 2152 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| ||||| ||||||||||||||| ||| |||||||| Sbjct 2151 GCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 2092 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | |||||| |||| ||| | || |||||||| || || Sbjct 2091 ACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 2032 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 2031 TTCACGAAGATCTGCAT 2015 >seq7266 Length=2119 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| || || ||||| || || Sbjct 1568 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCG 1509 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||||||||| ||||||||||||||| ||| || ||||| Sbjct 1508 GCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTC 1449 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | |||||| |||| ||| | || ||||||||||| || Sbjct 1448 ACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 1389 Query 127097 TTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 1388 TTCACGAAGATTTGCAT 1372 >seq4764 Length=3127 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| ||| || || || || ||||| || || Sbjct 98 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 157 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || ||||||||||||||| ||| ||||||||| Sbjct 158 GCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTG 217 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || |||| ||| | || ||||||||||| || Sbjct 218 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTC 277 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 278 TTCACGAAGATCTGCAT 294 >seq1785 Length=5934 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| ||| ||| |||||| || || ||||| || || Sbjct 4151 CGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCC 4210 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| |||| | ||||||||||| || || || |||||||||||| ||| |||||||| Sbjct 4211 AGCGAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTT 4270 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | |||||| |||| || | || |||||||| || || Sbjct 4271 CACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGT 4330 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 4331 CTTGACGAAGATCTGCAT 4348 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | | |||||| || || ||||| || ||| Sbjct 4380 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCA 4439 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| |||||||| ||||| ||||||||| ||| || ||||| Sbjct 4440 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTC 4499 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| |||| ||| | || ||||||||||| || Sbjct 4500 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 4559 Query 127097 TTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 4560 TTGACGAAGATTTGCAT 4576 >seq3858 Length=3670 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| || || || || ||||| || || Sbjct 906 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCC 847 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || ||||||||||||||| ||| || ||||| Sbjct 846 GCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTC 787 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | |||||| |||| ||| | || ||||||||||| || Sbjct 786 ACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 727 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 726 TTGACGAAGATCTGCATG 709 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| || || ||||| || || Sbjct 678 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 619 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| ||||||||| Sbjct 618 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 559 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || |||| ||| | || ||||| ||||| || Sbjct 558 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 499 Query 127097 TTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 498 TTCACGAAGATTTGCATG 481 >seq4204 Length=3449 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| ||||| || || || ||||| ||| | Sbjct 237 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 178 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 177 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 118 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| |||||||| | | |||| ||||| | |||||| Sbjct 117 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCGCTCGACTCGACC 58 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||| || || || || || || || || ||||||||| Sbjct 57 TCGAGAGTAATCGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATG 10 >seq15283 Length=765 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 197 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 138 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| |||||||| Sbjct 137 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 78 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| |||| ||| | || |||||||| || || Sbjct 77 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 18 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 17 TTCACGAAGATCTGCAT 1 >seq4792 Length=3108 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| ||||| || || ||||| || || Sbjct 1707 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGCTTACCC 1648 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| |||||||| Sbjct 1647 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 1588 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| |||| ||| | || |||||||| || || Sbjct 1587 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1528 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1527 TTCACGAAGATCTGCAT 1511 >seq6454 Length=2394 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| ||| | | || || || || ||||| || || Sbjct 98 GTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCC 157 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || ||||||||||||||| ||| ||||||||| Sbjct 158 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 217 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || |||| ||| | || ||||| || || || Sbjct 218 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTC 277 Query 127097 TTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 278 TTCACGAAGATTTGCATG 295 >seq1372 Length=6757 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||| | ||||||||||| || || ||||||||||||||| ||| ||| Sbjct 6658 TTGCCCGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 6599 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||| | | |||| |||||| | |||||| |||| || | || || ||||| Sbjct 6598 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATTGTCTTACCGGTG 6539 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 || || || || || |||||||| Sbjct 6538 AGGGTCTTCACGAAGATCTGCAT 6516 >seq378 Length=11515 Score = 84.2 bits (92), Expect = 2e-11 Identities = 323/497 (65%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 145720 TCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGTC 145779 |||||||||||||| |||| | ||||| || ||||| || ||||||||||||||| Sbjct 5747 TCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGGTAGTACATGCCGGTC 5688 Query 145780 TTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACC---GAGTACGTGGGT 145836 ||||| || |||| | ||| ||||| | |||| ||| | | ||| ||| Sbjct 5687 TTGAGGCCCTTGCGCCAGGCGTAGAAGTGCA---TCGAGGTGAGCTTGGCAAACGAGGGC 5631 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 ||| | | | | || || || |||||||| || ||| | | | || ||||||||| Sbjct 5630 TCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCC 5571 Query 145897 ATGTCTATCATG-CACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTG 145955 ||||| || ||| | | || | ||||| |||| || | || | ||||| || Sbjct 5570 ATGTCGATGATGACGCGCTG-CGGGAGCTCCCACACGGTCTTGTACAGCTTCTTGATGTC 5512 Query 145956 CTGGGGTATTTCGTCAATGTTCTGCACAGACCCATT-TTCG-GCCAATATT-TTGTTGCG 146012 | ||| || || || ||| ||| || || || || | || | | | || || ||| | Sbjct 5511 GTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAGACGAGCTTGTTCTTGAG 5452 Query 146013 CAATTCTGGAGTGTAAATGTTCAAGTCTAC--GAGGGCCTTGATGAGATACTGGTTGACC 146070 | | || | | | | | || | ||| | | || | || |||||| Sbjct 5451 C---GCGGGCGACCAGAGG--CCGCGCTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACG 5397 Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130 || || ||||||||||| | ||| | || | |||| | ||| | ||||| || Sbjct 5396 ACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAG 5337 Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190 |||||||||| || || ||||||| |||| || || |||||| |||||| || | Sbjct 5336 CACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGC 5277 Query 146191 GAGTTTCTCACGCCGTG 146207 ||||| | || ||||| Sbjct 5276 GAGTTGCGCAGACCGTG 5260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475393229831520