Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3858 172 6e-38 seq4764 161 1e-34 seq6454 156 5e-33 seq7266 150 2e-31 seq140 150 2e-31 seq15283 149 7e-31 seq4204 149 7e-31 seq4792 145 9e-30 seq1785 145 9e-30 seq7588 143 3e-29 seq6713 143 3e-29 seq6806 141 1e-28 seq6105 136 4e-27 seq1932 127 2e-24 seq8684 113 5e-20 seq3544 105 8e-18 seq173 100 3e-16 seq91 100 3e-16 seq85 93.3 5e-14 seq351 82.4 9e-11 >seq3858 Length=3670 Score = 172 bits (190), Expect = 6e-38 Identities = 155/195 (79%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 673 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 614 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||||| ||||| | Sbjct 613 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 554 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||||||| || || || | |||||||| ||||| ||||| || || || Sbjct 553 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 494 Query 46582 AAAGATTTGCATTTT 46596 ||||||||||| || Sbjct 493 GAAGATTTGCATGTT 479 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || || || |||| ||||||||||| || ||||| Sbjct 901 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAA 842 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||||| |||||| | ||| | | Sbjct 841 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 782 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || || || || | |||||||| ||||| |||||||| || || Sbjct 781 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGAC 722 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 721 GAAGATCTGCAT 710 >seq4764 Length=3127 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| | | ||| | || || || | ||| |||||| ||||| |||||||||| Sbjct 67 GCCTCCGCGAAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGC 126 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || || || |||| |||||||||||||||||||| || | ||||||||| || | || Sbjct 127 CAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGG 186 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| |||||||| ||||| || | | |||||||||||| || || Sbjct 187 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCAAC 246 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || | || ||||| ||||| ||||| || || || ||||| |||||| Sbjct 247 CTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 295 >seq6454 Length=2394 Score = 156 bits (172), Expect = 5e-33 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || || || |||| |||||||||||||| ||||| Sbjct 104 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAG 163 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | || | || |||||||||| |||||||| ||||| || Sbjct 164 ATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTC 223 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||||||||| || || || | |||||||| ||||| || || || || || Sbjct 224 TCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACG 283 Query 46583 AAGATTTGCATTTT 46596 ||||||||||| || Sbjct 284 AAGATTTGCATGTT 297 >seq7266 Length=2119 Score = 150 bits (166), Expect = 2e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 1563 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 1504 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| |||| || | || |||||||||| |||||| | ||| | | Sbjct 1503 GATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 1444 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || |||||||| || || || | |||||||| ||||| ||||| || || || Sbjct 1443 CTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1384 Query 46582 AAAGATTTGCATT 46594 |||||||||||| Sbjct 1383 GAAGATTTGCATT 1371 >seq140 Length=17166 Score = 150 bits (166), Expect = 2e-31 Identities = 151/195 (77%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| ||||| || |||| |||||||||||||||||||| Sbjct 1245 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1304 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| ||| | || |||||||||| |||||||| ||| | | Sbjct 1305 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1364 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | ||||| |||| || || || | |||||||| ||||| ||||| || || Sbjct 1365 CTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 1421 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 1422 GACGAAGATCTGCAT 1436 >seq15283 Length=765 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || ||||| |||| |||||||||||||||||||| Sbjct 192 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 133 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||||| ||| | | Sbjct 132 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 73 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||| || || || || | |||||||| ||||| || || || || || Sbjct 72 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 13 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 12 GAAGATCTGCAT 1 >seq4204 Length=3449 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 202 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 143 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||||| ||| | | Sbjct 142 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 83 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||||| || || || | || || || || ||||| || || || || Sbjct 82 CTCGATAGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTGAGGGTCTTCAC 23 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 22 GAAGATCTGCAT 11 >seq4792 Length=3108 Score = 145 bits (160), Expect = 9e-30 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | |||||||| |||| ||||||||||| || ||||| Sbjct 1702 CTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 1643 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||||| ||| | | Sbjct 1642 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1583 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||| || || || || | |||||||| ||||| || || || || || Sbjct 1582 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1523 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 1522 GAAGATCTGCATT 1510 >seq1785 Length=5934 Score = 145 bits (160), Expect = 9e-30 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| || || || Sbjct 4385 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAA 4444 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || ||||||||| |||||| | ||| | | Sbjct 4445 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTT 4504 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||| || || || || | |||||||| ||||| ||||| || || || Sbjct 4505 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 4564 Query 46582 AAAGATTTGCATT 46594 |||||||||||| Sbjct 4565 GAAGATTTGCATT 4577 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct 4157 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 4216 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | | |||||||||| |||||||| ||| | | Sbjct 4217 GATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 4276 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| ||| || || || | |||||||| ||||| || || || || || Sbjct 4277 CTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 4336 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 4337 GAAGATCTGCAT 4348 >seq7588 Length=2028 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 225 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 166 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| |||| ||| | || ||||||||| |||||||| ||| | | Sbjct 165 GATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 106 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| || || || || | || || || ||||| ||||| || || || Sbjct 105 CTCGATGGTGTCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTCAGGGTCTTGAC 46 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 45 GAAGATCTGCAT 34 >seq6713 Length=2293 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| || || || |||| |||||||||||||||||||| Sbjct 202 CTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 143 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||||| ||| | | Sbjct 142 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 83 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || |||||||| || || || | || || || || || ||||| || || || Sbjct 82 CTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCGGTCAGGGTCTTCAC 23 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 22 GAAGATCTGCAT 11 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || || | || |||||||||||||||||||| Sbjct 430 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGACCATCCTCGAGCTGCTTGCCGGCGAA 371 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||||| ||| | | Sbjct 370 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 311 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | ||||| |||| || || || | ||||| || ||||| || || || || Sbjct 310 CTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTT 254 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 253 GACGAAGATCTGCAT 239 >seq6806 Length=2266 Score = 141 bits (156), Expect = 1e-28 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| |||||||| |||| |||||||||||||| ||||| Sbjct 2206 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2147 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||||| |||||||| ||| | | Sbjct 2146 GATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2087 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || || || || | |||||||| ||||| || || || || || Sbjct 2086 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 2027 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 2026 GAAGATCTGCATT 2014 >seq6105 Length=2518 Score = 136 bits (150), Expect = 4e-27 Identities = 148/196 (76%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC---GAGCTGCTTGCCGGC 46458 |||||| ||||| |||| ||||| || ||||| |||| || ||||||||||||||| Sbjct 2066 CTCCTTCTGGATGTTGTGGTCGGCCAGGGTGCGGCCGTCCTCCTCGAGCTGCTTGCCGGC 2125 Query 46459 GAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAG 46518 ||| || | |||| ||||||||| ||| | || ||||||||| || ||||| || | Sbjct 2126 GAAGATGAGGCGCAGCTGGTCGGGCGGGATGCCTCCCTTGTCCAGGAGCTTCTGCTGCAC 2185 Query 46519 CGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | | ||||| ||||| || || || | ||||||||| | |||||| || || || Sbjct 2186 CTCCTCAATCGTGTAGCTCGGCTCGACCTCGAGCGTGATGGTATGGCCCGTGAGAGTCTT 2245 Query 46579 AACAAAGATTTGCATT 46594 || ||||| |||||| Sbjct 2246 CACGAAGATCTGCATT 2261 >seq1932 Length=5666 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || | || |||| ||||||||||| || ||||| Sbjct 5589 CTCCTTCTGGATGTTGTAGTCGGCCAGGGCACGGCCGTCCTCGAGCTGCTTACCCGCGAA 5530 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || ||||||||| ||||| | ||| | | Sbjct 5529 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTCACGTT 5470 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| || || || |||| |||||||| ||||| || || || || || Sbjct 5469 CTCGATGGTGTCGCTGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 5410 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 5409 GAAGATCTGCATT 5397 >seq8684 Length=1752 Score = 113 bits (124), Expect = 5e-20 Identities = 142/194 (73%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGC-GA 46460 |||||| ||||| |||||||| | || ||||| |||| ||||||||||||||||| || Sbjct 31 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGGA 90 Query 46461 ATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG 46520 | | | || |||||| |||| || | || |||||||||| |||||||| ||||| Sbjct 91 AGAAGAGGCACTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGC 150 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 || | | ||||||||| || || || || | ||| || |||| ||| || || | Sbjct 151 TCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGCAGGCCTTGCTGTGCAGGGTCTTCA 210 Query 46581 CAAAGATTTGCATT 46594 ||||| | |||| Sbjct 211 AGAAGATATACATT 224 >seq3544 Length=3891 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || ||||| |||| |||||||||||||||||||| Sbjct 470 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 529 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 | | || |||||| |||| | | || |||||||||| |||||||| ||||| | Sbjct 530 GAAGAGGCACTGCTGATCGGGGGCGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGCT 589 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || || || || | ||| || |||| ||| || || | Sbjct 590 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTGCAGGCCTTGCTGTGCAGGGTCTTCAA 649 Query 46582 AAAGATTTGCATT 46594 ||||| | |||| Sbjct 650 GAAGATATACATT 662 >seq173 Length=15809 Score = 100 bits (110), Expect = 3e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | || |||||| |||||| | |||||||| || |||| |||| || Sbjct 1502 CACGAGGTGGAGCGTGCTCTCCGGTTGGATGTCGTAGTCGGCCAGCGTGCAGCCGTCCTC 1561 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC-- 46501 |||||||||||||||||| || | |||||||||||||| ||| | || |||| ||||| Sbjct 1562 GAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGG-CGGGATGCCCTCCATGTCCTG 1620 Query 46502 -ATGATCTTCTTC 46513 ||||| | |||| Sbjct 1621 GATGATGTCCTTC 1633 >seq91 Length=20340 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| | | | |||| |||||||||||||| ||| | Sbjct 1510 TCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCGCAG 1569 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||| | || ||||||| ||||||||| | ||||| ||| | ||| Sbjct 1570 ATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTTCTGCTTCACAGTC 1629 Query 46523 GCCACCGTGTCGCTCGAT-TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | |||||||||| || | ||||| || | |||||| || |||| || | || || Sbjct 1630 TCTACCGTGTCGC-CGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGATAGGGCCTTCAC 1688 Query 46582 AAAGATTTGCATTT 46595 ||||||||||||| Sbjct 1689 GAAGATTTGCATTT 1702 >seq85 Length=20598 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| | | |||| ||||| |||| || |||||| ||||| |||||||||| Sbjct 5453 GCCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 5512 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || ||||| |||| |||||||||||||| || || |||| |||||||||||| Sbjct 5513 CAGTGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTC 5566 >seq351 Length=11865 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCG--CTCGTCGTCGAGCTGCTTGCCGGCG 46459 |||||| ||||| |||||||||| || ||||| || || |||||||||||||||||| Sbjct 8545 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTGGT--TCGAGCTGCTTGCCGGCG 8602 Query 46460 AATATCAAGCGCTGCTGGTCG 46480 || || | ||||||||||||| Sbjct 8603 AAGATGAGGCGCTGCTGGTCG 8623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565110528942960