Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq14000 116 3e-20 seq7456 114 1e-19 seq8422 111 1e-18 seq42 111 1e-18 seq14347 109 4e-18 seq6106 107 2e-17 seq5859 107 2e-17 seq3368 107 2e-17 seq9705 105 5e-17 seq62 102 7e-16 seq15420 100 2e-15 seq1075 100 2e-15 seq275 100 2e-15 seq35 100 2e-15 seq6198 98.7 8e-15 seq609 98.7 8e-15 seq787 95.1 1e-13 seq10595 93.3 3e-13 seq5480 93.3 3e-13 seq8258 91.5 1e-12 seq6077 91.5 1e-12 seq1473 91.5 1e-12 seq7036 89.7 4e-12 seq711 89.7 4e-12 seq500 89.7 4e-12 seq6015 87.8 1e-11 seq16896 86.0 5e-11 seq16500 86.0 5e-11 seq12053 86.0 5e-11 seq11040 86.0 5e-11 seq9723 86.0 5e-11 >seq14000 Length=956 Score = 116 bits (128), Expect = 3e-20 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| | || || || ||||| ||||| || || || || ||| Sbjct 1 AACGAGCTGATTCCGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 60 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || | |||||||||||||| || Sbjct 61 AAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACAGGGATCTCAAGTCACTCAAC 120 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || ||||| | ||||||||||| Sbjct 121 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGCCTCACCAAGTTCAA 179 >seq7456 Length=2066 Score = 114 bits (126), Expect = 1e-19 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | |||||||| ||||| || || || ||| ||||| || || || || Sbjct 693 AACGAGCTGATTCCGGACATTCCGTTCGCGCTGCGGAAC--AAGATGGCCTACCAGGCGG 750 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || || || ||||||||||| || | Sbjct 751 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGATCTCAAGTCCCTCA 810 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCA 1147291 | || || | || ||||||||||| ||||| || || || || || |||||||||||| Sbjct 811 ACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGTGAGCGACTTCGGGCTGACCAAGTTCA 870 Query 1147292 A 1147292 | Sbjct 871 A 871 >seq8422 Length=1807 Score = 111 bits (122), Expect = 1e-18 Identities = 118/154 (77%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | ||||| || | || || || ||| ||| ||||| || || ||||| Sbjct 800 AACGAGCTCATTCCCGACCTGCCCTTCGCGCTCCGGAAC--AAGATGGCGTACCAAGCAG 743 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| |||||||| || || || || || ||||| ||||| ||||||||||| || | Sbjct 742 CCAAGGGCATGCATTTCCTGCACTCCTCCGGCATTGTGCATCGCGATCTCAAGTCGCTCA 683 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || ||||| | |||||||||||||| ||||| || Sbjct 682 ATCTGTTGCTCGATTCCAAGTGGAACGTCAAGGT 649 >seq42 Length=25181 Score = 111 bits (122), Expect = 1e-18 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| | || || || ||||| ||||| || || || || ||| Sbjct 13172 AACGAGCTGATTCCGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 13113 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 13112 AAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 13053 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || ||||| | ||||||||||| Sbjct 13052 CTGCTGCTCGACACCAAGTGGAACGTCAAGGTGAGCGACTTTGGCCTCACCAAGTTCAA 12994 >seq14347 Length=900 Score = 109 bits (120), Expect = 4e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 1147108 CTCGAGAATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAA 1147167 ||| | || ||| | || |||||| | || || || || || ||||| || || || Sbjct 261 CTCCACAACGAGCTGATCCCGGAACTGCCGTTCGCGCTTAAGGCCAAGATGGCCTACCAG 320 Query 1147168 GCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCA 1147227 ||||||||||| ||||| || || || ||||| || || || || || || |||||||| Sbjct 321 GCTTCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCC 380 Query 1147228 CTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAG 1147287 || || || || | || |||||||||| ||||| || || || ||| |||||||| Sbjct 381 CTCAACCTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGTCGGACTTCGGTCTGACCAAG 440 Query 1147288 TTCAA 1147292 ||||| Sbjct 441 TTCAA 445 >seq6106 Length=2518 Score = 107 bits (118), Expect = 2e-17 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| ||||| || || || || ||||| || || || | ||| Sbjct 2306 AACGAGCTCATTCCGGACATTCCGTTCGCACTGAAGGCCAAGATGGCGTACCAGGGTTCG 2365 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 2366 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 2425 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || ||||||||||| ||||| || || ||||| | ||||||||||| Sbjct 2426 CTGCTGCTCGACTCCAAGTGGAACGTCAAGGTCTCCGACTTTGGCCTCACCAAGTTCAA 2484 >seq5859 Length=2621 Score = 107 bits (118), Expect = 2e-17 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | || |||||| | || || || ||||| ||||| || || || |||||| Sbjct 2370 AACGAGCTGATCCCGGAACTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCTTCC 2311 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || || || || || || || || || |||||||| || || Sbjct 2310 AAGGGCATGCACTTCCTCCACTCCTCGGGCATCGTGCACCGCGACCTCAAGTCCCTCAAC 2251 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || ||| ||||||||||||| Sbjct 2250 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGTCGGACTTCGGTCTGACCAAGTTCAA 2192 >seq3368 Length=4017 Score = 107 bits (118), Expect = 2e-17 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| ||||| || || || || ||||| || || || | || Sbjct 3805 AACGAGCTCATTCCGGACATTCCGTTCGCGCTGAAGGCCAAGATGGCGTACCAGGGCTCG 3864 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || ||||||||||| || Sbjct 3865 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCACTCAAC 3924 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || ||||||||||| ||||| || || ||||| | ||||||||||| Sbjct 3925 CTGCTGCTCGACTCCAAGTGGAACGTCAAGGTCTCCGACTTTGGCCTCACCAAGTTCAA 3983 >seq9705 Length=1544 Score = 105 bits (116), Expect = 5e-17 Identities = 133/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | || ||||| ||||| || || || ||| ||||| || || || || Sbjct 718 AACGAGCTGATCCCGGACATTCCGTTCGCGCTGCGGAAC--AAGATGGCCTACCAGGCGG 775 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || || || || |||||||| || | Sbjct 776 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCA 835 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCA 1147291 | || || | || ||||||||||| ||||| || || || || || |||||||||||| Sbjct 836 ACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGTGAGCGACTTCGGGCTGACCAAGTTCA 895 Query 1147292 A 1147292 | Sbjct 896 A 896 >seq62 Length=22715 Score = 102 bits (112), Expect = 7e-16 Identities = 233/350 (67%), Gaps = 3/350 (1%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 |||| || || || || ||||||| ||||| || || || ||||| || || || || Sbjct 20429 AAGACCGCCTACCAGGCCGCCAAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTCCAC 20488 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || ||||||||||| || || || || |||| ||||||||||| ||||| || || Sbjct 20489 CGCGATCTCAAGTCGCTCAACCTGCTGCTGGACTCCAAGTGGAACGTCAAGGTGTCCGAC 20548 Query 1147273 TTTGGTTTGACCAAGTTCAAATCTGATATGGATAAAAACAA---ATCCGAAAAACAACTT 1147329 ||||| | ||||||||| || || ||| | || | | | | | || || Sbjct 20549 TTTGGGCTCACCAAGTTCCGCTCGGAGATGAAGAAGGGCCAGGGCCCGGCCGACCACCTG 20608 Query 1147330 AACTGTAGCATTCATTGGACAGCTCCTGAAATCCTTAACGATTCATCCAATGTTGATTAT 1147389 | | ||||| || ||||| || || || ||||| ||||| | | | || | Sbjct 20609 CAGGGCAGCATCCACTGGACCGCGCCCGAGATCCTCAACGAGGCGCTCGACTCCGACTTC 20668 Query 1147390 ATTTTGGCTGATGTCTATTCGTTTGGCATCATTCTCTGGGAATTGTTTACTCGTTCCAAG 1147449 || | || || ||||| || |||||||| |||||||| | | || || ||| || Sbjct 20669 ATACTCGCCGACGTCTACAGCTTCGGCATCATCCTCTGGGAGATCCTCACCCGCTCCCAG 20728 Query 1147450 CCATATCTAGGTATGTCTCCTGCCGCGATTGCAGTTGCCGTTATTCGTGA 1147499 || || || ||| ||||| ||||| || || || || ||||| || Sbjct 20729 CCCTACGAGGGAATGAGCCCTGCGGCGATCGCTGTGGCGGTGATTCGCGA 20778 >seq15420 Length=746 Score = 100 bits (110), Expect = 2e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | ||||| || ||||| | | |||| | | ||||| || || || || || Sbjct 562 AACGAGCTCATTCCTGAGATTCCGCTGGAGCTCACAGTGAAGATGGCGTACCAGGCGGCC 621 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| | || || || || || |||||||| || || Sbjct 622 AAGGGGATGCACTTCCTGCACTCGTC--GCATCGTGCACCGCGACCTCAAGTCGCTCAAC 679 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 || || | || |||||||||| ||||| || || || ||||| ||||||||||| Sbjct 680 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGGCTGACCAAGTTC 736 >seq1075 Length=7598 Score = 100 bits (110), Expect = 2e-15 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | |||||||| || || || || || ||| ||||| || || || || Sbjct 5736 AACGAGCTGATTCCGGACATCCCGTTCGCTCTGCGCAAC--AAGATGGCCTACCAGGCGG 5793 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || ||||| ||||||||||| || | Sbjct 5794 CCAAGGGCATGCACTTCCTCCACTCGTCCGGAATCGTCCATCGCGATCTCAAGTCGCTCA 5853 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGT 1147269 ||||| | | || ||||||||||| ||||| || ||| Sbjct 5854 ATTTGCTTCTCGACTCCAAGTGGAACGTCAAGGTCAGT 5891 Score = 95.1 bits (104), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 1001563 AGTTAATTCATAATGAACTAATTCCTGAAATTCCATTCGCTCT---CAAAGTTAAAATGG 1001619 |||| | || || || || ||||| || || || |||||||| ||| || |||| Sbjct 5725 AGTTGCTGCACAACGAGCTGATTCCGGACATCCCGTTCGCTCTGCGCAAC---AAGATGG 5781 Query 1001620 CTTACCAAGCTTCAAAAGGAATGCATTTTCTCCATTCATCCGGAATTGTTCATCGTGATC 1001679 | ||||| || | || || ||||| || ||||| || |||||||| || ||||| |||| Sbjct 5782 CCTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCCGGAATCGTCCATCGCGATC 5841 Query 1001680 TTAAATCACTCAATTTGCTACTTGATGCTAAATGGAATGTTAAAGTTAG 1001728 | || || ||||||||||| || || | || ||||| || || || || Sbjct 5842 TCAAGTCGCTCAATTTGCTTCTCGACTCCAAGTGGAACGTCAAGGTCAG 5890 >seq275 Length=13074 Score = 100 bits (110), Expect = 2e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || || || || |||||||| ||||| ||| | || ||||| || || |||||| Sbjct 8994 AAGGTGGCCTACCAGGCCTCCAAGGGCATGCACTTTTTGCACTCGTCGGGCATCGTTCAT 9053 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 |||||||| ||||| || ||| | || |||||||||||||||| ||||| || Sbjct 9054 CGTGATCTGAAGTCCCTCAATCTCCTGCTGGATTCCAAGTGGAACGTCAAGGT 9106 Score = 89.7 bits (98), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || || ||||| || ||||||||||| | || || || || ||||| Sbjct 11378 AACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAACGCGACGATGACC 11437 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 |||||||| || || || ||||| ||||| || | || || || || || ||| ||||| Sbjct 11438 CGCTGTGGCACCCCTTGCTGGACGGCACCGGAGGTCATCCGCGGCGAGAAGTACGACGAA 11497 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATG 1003604 || || || || | || || || | | ||||||||| || Sbjct 11498 AAGGCCGACGTGTACTCGTTCGGCATCATCATGTGGGAAGTG 11539 >seq35 Length=26415 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| ||||| || || Sbjct 25683 AAGATGGCCTACCAGGCGGCCAAGGGCATGCACTTCCTGCACTCGTCGGGTATCGTGCAC 25742 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || || |||||||| || || || || | || |||||||||| ||||| || || || Sbjct 25743 CGGGACCTCAAGTCGCTCAACCTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGAC 25802 Query 1147273 TTTGGTTTGACCAAGTTCAA 1147292 ||||| | ||||||||||| Sbjct 25803 TTTGGCCTCACCAAGTTCAA 25822 >seq6198 Length=2485 Score = 98.7 bits (108), Expect = 8e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | ||||| || || || | | || || | ||||| || || || || || Sbjct 187 AACGAGCTCATTCCAGACATACCGCTGGAACTGAAGGTGAAGATGGCGTACCAGGCGGCC 128 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 127 AAGGGGATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 68 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 || || | || |||||||||| ||||| || || || ||||| ||||||||||| Sbjct 67 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGGCTGACCAAGTTC 11 >seq609 Length=9511 Score = 98.7 bits (108), Expect = 8e-15 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | || ||||| || || || || || ||| ||||| || || || || Sbjct 2539 AACGAGCTGATCCCGGACATCCCGTTCGCGCTGCGCAAC--AAGATGGCCTACCAGGCGG 2482 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || ||||| || || || |||||||| || | Sbjct 2481 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATTGTGCACCGCGACCTCAAGTCGCTCA 2422 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCA 1147291 || || | |||| ||||||||||| ||||| || || || || |||||||||||| Sbjct 2421 ATCTGCTCCTGGACTCCAAGTGGAACGTCAAGGTGTCCGACTTCGGCCTGACCAAGTTCA 2362 >seq787 Length=8680 Score = 95.1 bits (104), Expect = 1e-13 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 1003425 CTGGTTGATGAAAATGATAATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAA 1003484 ||||| || || || || || || || || || || || |||||||||||||| | Sbjct 351 CTGGTGGACGAGAACTGGAACGTGAAGGTGGCCGACTTCGGGTTTGCGCGCATCAAGGAG 410 Query 1003485 GAAAATGCAACAATGACTCGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGT 1003544 || || || || ||||| ||||| || || || || ||||| || ||||| || | || Sbjct 411 GAGAACGCCACCATGACCCGCTGCGGCACGCCCTGCTGGACCGCGCCCGAGATCCTCCGC 470 Query 1003545 GGAGAAAAATACAACGAAAAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATG 1003604 ||||| || ||| |||| || || || || || || || || || | ||||||||| || Sbjct 471 GGAGAGAAGTACGACGAGAAGGCCGACGTGTTCTCGTTCGGAGTCATCATGTGGGAAGTG 530 >seq10595 Length=1398 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1003418 CAATATTCTGGTTGATGAAAATGATAATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCAT 1003477 |||| | ||||| ||||| || || || || ||||| ||||| || || |||||||| Sbjct 1004 CAATCTGCTGGTGGATGAGAACTGGAACGTGAAGGTAGCCGATTTCGGGTTCGCGCGCAT 1063 Query 1003478 CAAACAAGAAAATGCAACAATGACTCGCTGTGGTACTCCGTGTTGGACAGCACCCGAAAT 1003537 ||| | || ||||| || ||||| |||||||| || || || ||||| |||||||| || Sbjct 1064 CAAGGAGGAGAATGCCACCATGACCCGCTGTGGCACGCCCTGCTGGACCGCACCCGAGAT 1123 Query 1003538 TATTCGTGGAGAAAAATAC 1003556 | || || || || ||| Sbjct 1124 ACTCCGCGGCGAGAAGTAC 1142 >seq5480 Length=2771 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 1147150 CTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTT 1147209 || ||||| || || || || ||||||| ||||| || || || ||||| || || || Sbjct 2704 CTCAAGATGGCGTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTG 2645 Query 1147210 CATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGT 1147269 || || || |||||||| || ||| | | | || |||||||||| |||| || || Sbjct 2644 CACCGCGACCTCAAGTCCCTCAATCTCCTCCTCGACGCCAAGTGGAACCTCAAGGTCAGC 2585 Query 1147270 GATTTTGGTTTGACCAAGTTC 1147290 || || ||||||||||||||| Sbjct 2584 GACTTCGGTTTGACCAAGTTC 2564 >seq8258 Length=1849 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | || ||||| ||||| || || || ||| ||||| || ||||| || Sbjct 342 AACGAGCTGATCCCGGACATTCCGTTCGCACTGCGGAAC--AAGATGGCCTATCAGGCAG 399 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || ||||| || |||||||| || | Sbjct 400 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCATCGCGACCTCAAGTCGCTCA 459 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAA 1147262 | || || | || ||||||||||| ||||| Sbjct 460 ACCTGCTGCTCGACTCCAAGTGGAACGTCAA 490 >seq6077 Length=2533 Score = 91.5 bits (100), Expect = 1e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| || || || ||| Sbjct 2508 AAGATCGCCTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCAT 2449 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || || ||||||||||| ||| || || | || ||||||||||| ||||| || Sbjct 2448 CGCGACCTCAAGTCACTCAATCTGCTGCTCGACTCCAAGTGGAACGTCAAGGT 2396 >seq1473 Length=6523 Score = 91.5 bits (100), Expect = 1e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || |||||||| |||||||| ||||| || | ||||| || || || || ||| Sbjct 385 AAGGTCGCCTATCAAGCCTCCAAGGGCATGCACTTCTTGCATTCCTCCGGCATCGTCCAT 326 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || ||||||||||| || || || || | || ||||||||||| ||||| || Sbjct 325 CGCGATCTCAAGTCCCTCAACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGT 273 >seq7036 Length=2190 Score = 89.7 bits (98), Expect = 4e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| | || | || || || | ||||| || || || || || Sbjct 435 AACGAGCTCATTCCGGAGCTGCCGATCGCGCTGAAGGTGAAGATGGCGTACCAGGCGGCC 494 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || |||||||| || || || || || || ||||| || || || Sbjct 495 AAGGGCATGCACTTCCTGCATTCGTCGGGCATCGTGCACCGCGACCTCAAATCGCTCAAC 554 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || ||||||||| ||||| || ||| || || | ||||||||||| Sbjct 555 CTGCTGCTCGACAACAAGTGGAACGTCAAGGTCTCTGACTTCGGCCTCACCAAGTTCAA 613 >seq711 Length=9039 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1147144 CTCAAACTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGT 1147203 ||||| ||||||| || | || || ||||||| ||||| ||||| || ||||| | Sbjct 1427 CTCAAGGTAAAGATCGCCCACCAGGCGGCCAAGGGCATGCACTTTCTCCACTCGTCGGAG 1368 Query 1147204 ATTGTTCATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAA 1147263 ||||| || || || |||||||| || || || || | || |||||||||| ||||| Sbjct 1367 ATTGTGCACCGGGACCTCAAGTCGCTCAACCTGCTGCTCGACGCCAAGTGGAACGTCAAG 1308 Query 1147264 GTTAGTGATTTTGGTTTGACCAAGTTCAAATC 1147295 || || || || | ||||||||||| || Sbjct 1307 GTGGCCGACTTCGGGCTCACCAAGTTCAAGTC 1276 >seq500 Length=10287 Score = 89.7 bits (98), Expect = 4e-12 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 1001469 CGTCATCCTAATGTTGTATTATTTATGGCTGCCTGTACCAAACCTCCTAATATGTGTATT 1001528 ||||| || || || || | || ||||| ||| | ||||| || || || ||||| || Sbjct 3726 CGTCACCCCAACGTGGTCCTGTTCATGGCCGCCAGCACCAAGCCGCCCAAGATGTGCATC 3785 Query 1001529 GTCATGGAATTAATGTCACTTGGATCCATGTACGAGTTAATTCATAATGAACTAATTCCT 1001588 ||||||||||| ||| || || || | ||||| | || || || || || | || Sbjct 3786 GTCATGGAATTGATGGAGCTCGGCTCGCTTTACGACCTCATCCACAACGAGCTCCTGCCG 3845 Query 1001589 GAAATTCCATTCGCTCTCAAAGTTAAAATGGCTTACCAAGCTTCAAAAGGAATGCATTTT 1001648 | || || | | || | || ||||| ||||| || | || || ||||| || Sbjct 3846 GCGATCCCGCTGCCCCTGTGTCTGAAGATGGCCTACCAGGCGGCCAAGGGCATGCACTTC 3905 Query 1001649 CTCCATTCATCCGGAATTGTTCATCGTGATCTTAAATCACTCAA 1001692 ||||| || || ||||| || |||||||| || || || ||||| Sbjct 3906 CTCCACTCGTCGGGAATCGTGCATCGTGACCTCAAGTCCCTCAA 3949 >seq6015 Length=2559 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || || ||||| |||||||| ||||| || | ||||| || || || || ||| Sbjct 1466 AAGGTCGCCTACCAAGCCTCCAAGGGCATGCACTTCTTGCATTCCTCCGGCATCGTGCAT 1525 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || ||||||||||| || || || || | || ||||||||||| ||||| || Sbjct 1526 CGCGATCTCAAGTCCCTCAACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGT 1578 >seq16896 Length=594 Score = 86.0 bits (94), Expect = 5e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 1003425 CTGGTTGATGAAAATGATAATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAA 1003484 || || || || ||| || || || || || || || || || ||||||||||| | Sbjct 303 CTCGTGGACGAGAATTGGAACGTGAAGGTGGCCGACTTCGGGTTCGCGCGCATCAAGGAG 244 Query 1003485 GAAAATGCAACAATGACTCGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGT 1003544 || || || || ||||| ||||| || || || || ||||| || || || || || || Sbjct 243 GAGAACGCGACCATGACCCGCTGCGGCACGCCCTGCTGGACGGCGCCGGAGATCATCCGC 184 Query 1003545 GGAGAAAAATACAACGAAAAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATG 1003604 ||||| || ||| |||| || || || || || || || || || |||||| | || Sbjct 183 GGAGAGAAGTACGACGAGCGGGCCGACGTGTTCTCGTTCGGCGTGGTCATGTGGCAGGTG 124 Query 1003605 GTGAC 1003609 ||||| Sbjct 123 GTGAC 119 >seq16500 Length=629 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || || ||||| || ||||||||||| | || || || || ||||| Sbjct 448 AACGTGAAGGTGGCCGACTTTGGGTTCGCGCGCATCAAGGAGGAGAACGCGACCATGACG 507 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 || || || || ||||| ||||| || || || || || || || || || ||| |||| Sbjct 508 CGGTGCGGCACGCCGTGCTGGACGGCGCCGGAGATCATCCGCGGGGACAAGTACGACGAG 567 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || || || || || || || || |||||| | ||||||| Sbjct 568 CGGGCCGACGTGTTCTCCTTCGGCGTGGTCATGTGGCAGGTGGTGAC 614 >seq12053 Length=1197 Score = 86.0 bits (94), Expect = 5e-11 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 1147144 CTCAAACTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGT 1147203 ||||| | ||||| | || || || ||||||| ||||| || || || ||||| || Sbjct 521 CTCAAGGTCAAGATGGTCTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTC-GGC 579 Query 1147204 ATTGTTCATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAA 1147263 || || || || ||||||||||| || || | || | || |||||||||| ||||| Sbjct 580 ATCGTGCACCGCGATCTCAAGTCGCTCAACCTCCTGCTCGACGCCAAGTGGAACGTCAAG 639 Query 1147264 GTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || |||||| | ||||||||||| Sbjct 640 GTGTCCGACTTTGGTCTCACCAAGTTCAA 668 >seq11040 Length=1335 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || ||||| ||||| ||||||||||| | || || || || ||||| Sbjct 1310 AACGTGAAGGTCGCCGATTTCGGCTTCGCGCGCATCAAGGAGGAGAACGCCACCATGACC 1251 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 ||||| || || || ||||| || || ||||| ||||| || || || ||| ||| Sbjct 1250 CGCTGCGGCACGCCCGCCTGGACCGCGCCGGAAATCATTCGCGGCGAGAAGTACTCCGAG 1191 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || ||| | | || || || || |||||||| ||| |||| Sbjct 1190 AAGGCCGATCTGTACAGCTTCGGCGTCGTCATGTGGGAGATGCTGAC 1144 >seq9723 Length=1542 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || ||||| ||||| || ||||||||||| | || || || || ||||| Sbjct 1493 AACGTGAAGGTGGCTGACTTTGGGTTCGCGCGCATCAAGGAGGAGAACGCGACCATGACC 1434 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 ||||| || || || || ||||| || || || || | || || || || ||| |||| Sbjct 1433 CGCTGCGGCACGCCCTGCTGGACGGCGCCGGAGATCCTGCGCGGGGAGAAGTACGACGAG 1374 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || || || || || || | || |||||| || ||||||| Sbjct 1373 CGGGCCGACGTGTTCTCGTTCGGCATCGTCATGTGGCAAGTGGTGAC 1327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028338896138020