Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7266 84.2 2e-11 >seq7266 Length=2119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/203 (69%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 25171 CAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 ||||| ||||| | || || || || | ||||| || | ||||| |||| ||||| Sbjct 1367 CAACAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGT 1426 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 | | |||||| |||||| | || || ||||| || || || ||||| || || |||| Sbjct 1427 CGAGCGATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCTCCCG 1486 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 ||||||| | ||||| | || ||| || || ||||| || | | | | ||| | Sbjct 1487 ATCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACT 1546 Query 25350 ACAATATTCAAAAAGAATCCACC 25372 |||| || || || || |||||| Sbjct 1547 ACAACATCCAGAAGGAGTCCACC 1569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444993708519360